MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:48518184-48558190

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
6720427I07Rik	13	48532905 to 48546500	13595	-	lincRNA gene	RIKEN cDNA 6720427I07 gene
Mirc8	13	48536012 to 48538272	2260		complex/cluster/region	microRNA cluster 8, including Mirlet7d, Mirlet7f-1, and Mirlet7a-1
Mirlet7d	13	48536012 to 48536114	102	-	miRNA gene	microRNA let7d
Tssr122386	13	48536018 to 48536023	5	-	TSS region	transcription start site region 122386
Gm24111	13	48537825 to 48537921	96	+	miRNA gene	predicted gene, 24111
Tssr122387	13	48537827 to 48537834	7	-	TSS region	transcription start site region 122387
Mirlet7f-1	13	48537829 to 48537917	88	-	miRNA gene	microRNA let7f-1
Mirlet7a-1	13	48538179 to 48538272	93	-	miRNA gene	microRNA let7a-1
Tssr122388	13	48538184 to 48538190	6	-	TSS region	transcription start site region 122388
Gm37238	13	48542644 to 48545033	2389	-	unclassified gene	predicted gene, 37238
Cpgi5563	13	48545397 to 48546971	1574		CpG island	CpG island 5563
Tssr122389	13	48545743 to 48545758	15	-	TSS region	transcription start site region 122389
Tssr122390	13	48546452 to 48546465	13	-	TSS region	transcription start site region 122390
Tssr122391	13	48546470 to 48546492	22	-	TSS region	transcription start site region 122391
Tssr122392	13	48546493 to 48546524	31	-	TSS region	transcription start site region 122392
Tssr119662	13	48550808 to 48550845	37	+	TSS region	transcription start site region 119662
Tssr122393	13	48552319 to 48552330	11	-	TSS region	transcription start site region 122393
Tssr122394	13	48554712 to 48554723	11	-	TSS region	transcription start site region 122394