Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:48483570-48544859

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zfp169	13	48487647 to 48513451	25804	-	protein coding gene	zinc finger protein 169
Cpgi5561	13	48490421 to 48490900	479		CpG island	CpG island 5561
Tssr119659	13	48491006 to 48491011	5	+	TSS region	transcription start site region 119659
Tssr119660	13	48491032 to 48491047	15	+	TSS region	transcription start site region 119660
Tssr119661	13	48491060 to 48491065	5	+	TSS region	transcription start site region 119661
Gm36402	13	48491403 to 48505499	14096	+	lncRNA gene	predicted gene, 36402
Cpgi5562	13	48513202 to 48513690	488		CpG island	CpG island 5562
Tssr122385	13	48513394 to 48513452	58	-	TSS region	transcription start site region 122385
A830005F24Rik	13	48513570 to 48514859	1289	+	protein coding gene	RIKEN cDNA A830005F24 gene
6720427I07Rik	13	48532905 to 48546500	13595	-	lincRNA gene	RIKEN cDNA 6720427I07 gene
Mirlet7d	13	48536012 to 48536114	102	-	miRNA gene	microRNA let7d
Mirc8	13	48536012 to 48538272	2260		complex/cluster/region	microRNA cluster 8, including Mirlet7d, Mirlet7f-1, and Mirlet7a-1
Tssr122386	13	48536018 to 48536023	5	-	TSS region	transcription start site region 122386
Gm24111	13	48537825 to 48537921	96	+	miRNA gene	predicted gene, 24111
Tssr122387	13	48537827 to 48537834	7	-	TSS region	transcription start site region 122387
Mirlet7f-1	13	48537829 to 48537917	88	-	miRNA gene	microRNA let7f-1
Mirlet7a-1	13	48538179 to 48538272	93	-	miRNA gene	microRNA let7a-1
Tssr122388	13	48538184 to 48538190	6	-	TSS region	transcription start site region 122388
Gm37238	13	48542644 to 48545033	2389	-	unclassified gene	predicted gene, 37238