Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:48082722-48373149

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
A330033J07Rik 13 48044231 to 48262623 218392 - antisense lncRNA gene RIKEN cDNA A330033J07 gene
Cpgi5558 13 48086771 to 48087019 248 CpG island CpG island 5558
Gm36346 13 48107897 to 48111641 3744 - lincRNA gene predicted gene, 36346
Gm36183 13 48227702 to 48241412 13710 + lncRNA gene predicted gene, 36183
Cpgi5559 13 48227722 to 48228149 427 CpG island CpG island 5559
Gm49291 13 48239054 to 48262591 23537 - lincRNA gene predicted gene, 49291
Gm40939 13 48242373 to 48253779 11406 + lncRNA gene predicted gene, 40939
Cpgi5560 13 48260595 to 48262915 2320 CpG island CpG island 5560
Tssr119655 13 48261081 to 48261091 10 + TSS region transcription start site region 119655
Tssr119656 13 48261106 to 48261123 17 + TSS region transcription start site region 119656
Tssr119657 13 48261161 to 48261168 7 + TSS region transcription start site region 119657
Tssr119658 13 48261194 to 48261199 5 + TSS region transcription start site region 119658
Id4 13 48261427 to 48264036 2609 + protein coding gene inhibitor of DNA binding 4
A330048O09Rik 13 48272418 to 48273884 1466 - lincRNA gene RIKEN cDNA A330048O09 gene
Tssr122383 13 48273865 to 48273909 44 - TSS region transcription start site region 122383
Gm8588 13 48312670 to 48314251 1581 + pseudogene predicted gene 8588
Tssr122384 13 48314606 to 48314616 10 - TSS region transcription start site region 122384
Gm48648 13 48359459 to 48408512 49053 - lincRNA gene predicted gene, 48648