Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:47820330-48158608

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm35991 13 47843815 to 47851943 8128 + lncRNA gene predicted gene, 35991
D13Mit309 13 47844474 to 47844592 118 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 309
D13Mit309.2 13 47844572 to 47844760 188 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 309.2
D13Mit199 13 47846576 to 47846724 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 199
Gm40938 13 47902558 to 47948474 45916 - lncRNA gene predicted gene, 40938
G630093K05Rik 13 47910435 to 47934301 23866 + lincRNA gene RIKEN cDNA G630093K05 gene
4931429P17Rik 13 47960330 to 48018608 58278 - lincRNA gene RIKEN cDNA 4931429P17 gene
Twq4 13 47975634 to 47975634 0 QTL testis weight QTL 4
Tssr122382 13 47992392 to 47992406 14 - TSS region transcription start site region 122382
Gm36101 13 48031773 to 48042471 10698 + lincRNA gene predicted gene, 36101
Tssr119654 13 48031839 to 48031856 17 + TSS region transcription start site region 119654
A330033J07Rik 13 48044231 to 48262623 218392 - antisense lncRNA gene RIKEN cDNA A330033J07 gene
Cpgi5556 13 48046412 to 48046608 196 CpG island CpG island 5556
Cpgi5557 13 48082389 to 48082630 241 CpG island CpG island 5557
Cpgi5558 13 48086771 to 48087019 248 CpG island CpG island 5558
Gm36346 13 48107897 to 48111641 3744 - lincRNA gene predicted gene, 36346