Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:47242044-47922140

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf144b 13 47122720 to 47247991 125271 + protein coding gene ring finger protein 144B
Lfibq9 13 47129920 to 47675890 545970 QTL liver fibrosis QTL 9
Tssr119651 13 47246936 to 47246951 15 + TSS region transcription start site region 119651
Tssr119652 13 47246981 to 47246990 9 + TSS region transcription start site region 119652
Tssr119653 13 47247621 to 47247627 6 + TSS region transcription start site region 119653
Tssr122381 13 47274493 to 47274500 7 - TSS region transcription start site region 122381
Gm48612 13 47335251 to 47340939 5688 - lincRNA gene predicted gene, 48612
AA517650 13 47359428 to 47359700 272 unclassified gene expressed sequence AA517650
Gm35733 13 47438680 to 47439339 659 + lincRNA gene predicted gene, 35733
Gm40936 13 47461264 to 47464280 3016 + lncRNA gene predicted gene, 40936
Cpgi5555 13 47469024 to 47469176 152 CpG island CpG island 5555
D13Dcr10 13 47582044 to 47582140 96 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 10
D13Mit90 13 47638768 to 47639023 255 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 90
4930471G24Rik 13 47667550 to 47668392 842 + lincRNA gene RIKEN cDNA 4930471G24 gene
D13Mit94 13 47715648 to 47715795 147 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 94
Gm35928 13 47784231 to 47789591 5360 - lncRNA gene predicted gene, 35928
Chol18 13 47815991 to 47815991 0 QTL cholesterol 18
Chol15 13 47815991 to 47815991 0 QTL cholesterol 15
Gm35991 13 47843815 to 47851943 8128 + lncRNA gene predicted gene, 35991
D13Mit309 13 47844474 to 47844592 118 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 309
D13Mit309.2 13 47844572 to 47844760 188 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 309.2
D13Mit199 13 47846576 to 47846724 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 199
Gm40938 13 47902558 to 47948474 45916 - lncRNA gene predicted gene, 40938
G630093K05Rik 13 47910435 to 47934301 23866 + lincRNA gene RIKEN cDNA G630093K05 gene