Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:46538226-46738230

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cap2 13 46501903 to 46650281 148378 + protein coding gene CAP, adenylate cyclase-associated protein, 2 (yeast)
Gm47523 13 46605327 to 46619780 14453 - antisense lncRNA gene predicted gene, 47523
Tssr119604 13 46609544 to 46609574 30 + TSS region transcription start site region 119604
Cpgi5540 13 46609631 to 46609857 226 CpG island CpG island 5540
Tssr119605 13 46609792 to 46609801 9 + TSS region transcription start site region 119605
Cpgi5541 13 46619729 to 46619932 203 CpG island CpG island 5541
Tssr119606 13 46638226 to 46638230 4 + TSS region transcription start site region 119606
Cpgi5542 13 46669144 to 46670494 1350 CpG island CpG island 5542
Tssr119607 13 46669445 to 46669501 56 + TSS region transcription start site region 119607
Tssr4059 13 46669510 to 46669515 5 + TSS region transcription start site region 4059
Tssr119608 13 46669517 to 46669545 28 + TSS region transcription start site region 119608
Fam8a1 13 46669522 to 46678056 8534 + protein coding gene family with sequence similarity 8, member A1
Tssr119609 13 46669571 to 46669582 11 + TSS region transcription start site region 119609
Nup153 13 46679902 to 46727849 47947 - protein coding gene nucleoporin 153
Tssr122344 13 46696851 to 46696898 47 - TSS region transcription start site region 122344
Gm46412 13 46720557 to 46737102 16545 + lncRNA gene predicted gene, 46412
Tssr119610 13 46725260 to 46725272 12 + TSS region transcription start site region 119610
Tssr119611 13 46725446 to 46725471 25 + TSS region transcription start site region 119611
Tssr122345 13 46726607 to 46726615 8 - TSS region transcription start site region 122345
Cpgi5543 13 46726651 to 46728382 1731 CpG island CpG island 5543
Tssr122346 13 46727054 to 46727057 3 - TSS region transcription start site region 122346
Tssr122347 13 46727563 to 46727588 25 - TSS region transcription start site region 122347
Tssr122348 13 46727589 to 46727616 27 - TSS region transcription start site region 122348
Tssr122349 13 46727632 to 46727649 17 - TSS region transcription start site region 122349
Tssr122350 13 46727654 to 46727668 14 - TSS region transcription start site region 122350
Tssr122351 13 46727670 to 46727683 13 - TSS region transcription start site region 122351
Tssr122352 13 46727795 to 46727862 67 - TSS region transcription start site region 122352
Tssr122353 13 46727912 to 46727926 14 - TSS region transcription start site region 122353
Tssr122354 13 46727932 to 46728005 73 - TSS region transcription start site region 122354
Tssr4060 13 46728007 to 46728045 38 - TSS region transcription start site region 4060
Tssr119612 13 46736054 to 46736057 3 + TSS region transcription start site region 119612
Tssr119613 13 46736103 to 46736138 35 + TSS region transcription start site region 119613
Tssr122355 13 46736886 to 46736925 39 - TSS region transcription start site region 122355