Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:45106260-45556367

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40932 13 45106951 to 45117884 10933 + lincRNA gene predicted gene, 40932
D13Mit277 13 45140870 to 45140994 124 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 277
Gm8513 13 45186534 to 45187536 1002 - pseudogene predicted gene 8513
D13Mit267 13 45224654 to 45224747 93 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 267
Gm47448 13 45235635 to 45335588 99953 + lincRNA gene predicted gene, 47448
Gm34466 13 45246632 to 45267711 21079 - lincRNA gene predicted gene, 34466
Gm23755 13 45294654 to 45294996 342 - unclassified non-coding RNA gene predicted gene, 23755
D13Mit180 13 45331260 to 45331367 107 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 180
Gm40933 13 45359100 to 45371211 12111 + lncRNA gene predicted gene, 40933
Cpgi5531 13 45389392 to 45390570 1178 CpG island CpG island 5531
Tssr119571 13 45389734 to 45389750 16 + TSS region transcription start site region 119571
Mylip 13 45389742 to 45411940 22198 + protein coding gene myosin regulatory light chain interacting protein
Tssr119572 13 45391764 to 45391779 15 + TSS region transcription start site region 119572
Tssr119573 13 45391780 to 45391794 14 + TSS region transcription start site region 119573
Tssr119574 13 45403487 to 45403490 3 + TSS region transcription start site region 119574
Tssr119575 13 45410765 to 45410768 3 + TSS region transcription start site region 119575
Gm47455 13 45431002 to 45431331 329 + pseudogene predicted gene, 47455
Gm23387 13 45486224 to 45486330 106 - snRNA gene predicted gene, 23387
Cpgi5532 13 45507171 to 45508078 907 CpG island CpG island 5532
Tssr119576 13 45507438 to 45507515 77 + TSS region transcription start site region 119576
Gmpr 13 45507444 to 45546386 38942 + protein coding gene guanosine monophosphate reductase
Tssr119577 13 45507527 to 45507549 22 + TSS region transcription start site region 119577
Tssr119578 13 45507564 to 45507576 12 + TSS region transcription start site region 119578
Tssr119579 13 45507598 to 45507650 52 + TSS region transcription start site region 119579
Tssr119580 13 45516979 to 45517025 46 + TSS region transcription start site region 119580
Gm34582 13 45521186 to 45524440 3254 - lncRNA gene predicted gene, 34582
Tssr119581 13 45538806 to 45538839 33 + TSS region transcription start site region 119581
Atxn1 13 45549755 to 45965008 415253 - protein coding gene ataxin 1
Tssr122302 13 45553118 to 45553127 9 - TSS region transcription start site region 122302
Tssr122303 13 45556315 to 45556320 5 - TSS region transcription start site region 122303