Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:44220319-44740333

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47781 13 44232398 to 44239606 7208 + lincRNA gene predicted gene, 47781
Gm29676 13 44250092 to 44260123 10031 - lincRNA gene predicted gene, 29676
D13Mit49 13 44322063 to 44322211 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 49
Gm33958 13 44363836 to 44391117 27281 - lincRNA gene predicted gene, 33958
Gm27007 13 44400436 to 44455303 54867 - lincRNA gene predicted gene, 27007
Gm27036 13 44438834 to 44439813 979 - pseudogene predicted gene, 27036
Tssr119530 13 44439722 to 44439732 10 + TSS region transcription start site region 119530
1700029N11Rik 13 44439727 to 44457567 17840 + lincRNA gene RIKEN cDNA 1700029N11 gene
Tssr122280 13 44455305 to 44455324 19 - TSS region transcription start site region 122280
Gm34020 13 44467020 to 44470727 3707 - lncRNA gene predicted gene, 34020
Tssr119531 13 44467496 to 44467499 3 + TSS region transcription start site region 119531
Gm34084 13 44472417 to 44480319 7902 - lincRNA gene predicted gene, 34084
Tssr122281 13 44477051 to 44477060 9 - TSS region transcription start site region 122281
Tssr122282 13 44480306 to 44480309 3 - TSS region transcription start site region 122282
Tssr122283 13 44480319 to 44480333 14 - TSS region transcription start site region 122283
D13Sfk1 13 44483360 to 44483506 146 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 1
Gm40930 13 44504628 to 44508705 4077 + lncRNA gene predicted gene, 40930
Gm47792 13 44509558 to 44511037 1479 + lincRNA gene predicted gene, 47792
Tssr4057 13 44528869 to 44528871 2 + TSS region transcription start site region 4057
Cpgi5524 13 44535481 to 44535711 230 CpG island CpG island 5524
Gm34276 13 44537309 to 44568668 31359 - lincRNA gene predicted gene, 34276
Gm40931 13 44573582 to 44637009 63427 - lncRNA gene predicted gene, 40931
Tssr119532 13 44592698 to 44592709 11 + TSS region transcription start site region 119532
Gm47805 13 44622182 to 44625217 3035 + lincRNA gene predicted gene, 47805
D13Mit244 13 44646972 to 44647145 173 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 244
Tssr119533 13 44678554 to 44678562 8 + TSS region transcription start site region 119533
Tssr122284 13 44679279 to 44679284 5 - TSS region transcription start site region 122284
Tssr122285 13 44704504 to 44704514 10 - TSS region transcription start site region 122285
Tssr119534 13 44705902 to 44705918 16 + TSS region transcription start site region 119534
Cpgi5525 13 44729409 to 44731426 2017 CpG island CpG island 5525
Tssr119535 13 44729522 to 44729550 28 + TSS region transcription start site region 119535
Jarid2 13 44729535 to 44921643 192108 + protein coding gene jumonji, AT rich interactive domain 2
Tssr119536 13 44729600 to 44729614 14 + TSS region transcription start site region 119536
Tssr119537 13 44729639 to 44729697 58 + TSS region transcription start site region 119537
Tssr119538 13 44729794 to 44729807 13 + TSS region transcription start site region 119538
Tssr119539 13 44730594 to 44730598 4 + TSS region transcription start site region 119539
Tssr119540 13 44730726 to 44730816 90 + TSS region transcription start site region 119540
Tssr119541 13 44730881 to 44730907 26 + TSS region transcription start site region 119541
Tssr119542 13 44731019 to 44731036 17 + TSS region transcription start site region 119542
Tssr119543 13 44731265 to 44731276 11 + TSS region transcription start site region 119543
Tssr119544 13 44731281 to 44731292 11 + TSS region transcription start site region 119544
Tssr119545 13 44731325 to 44731341 16 + TSS region transcription start site region 119545
Tssr119546 13 44731353 to 44731373 20 + TSS region transcription start site region 119546
Tssr119547 13 44731568 to 44731583 15 + TSS region transcription start site region 119547
Tssr119548 13 44731724 to 44731738 14 + TSS region transcription start site region 119548
Tssr119549 13 44731842 to 44731861 19 + TSS region transcription start site region 119549
Cpgi5526 13 44733210 to 44734230 1020 CpG island CpG island 5526
Tssr119550 13 44734034 to 44734069 35 + TSS region transcription start site region 119550
Tssr119551 13 44736672 to 44736675 3 + TSS region transcription start site region 119551