Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:44107063-44537211

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5083 13 44121167 to 44125179 4012 + lincRNA gene predicted gene 5083
Tssr119526 13 44121294 to 44121322 28 + TSS region transcription start site region 119526
Cpgi5523 13 44139100 to 44139328 228 CpG island CpG island 5523
Gm33684 13 44150595 to 44151953 1358 + lincRNA gene predicted gene, 33684
A330076C08Rik 13 44193589 to 44216487 22898 - lincRNA gene RIKEN cDNA A330076C08 gene
Tssr119527 13 44197057 to 44197062 5 + TSS region transcription start site region 119527
Tssr119528 13 44197073 to 44197081 8 + TSS region transcription start site region 119528
Tssr122279 13 44197458 to 44197469 11 - TSS region transcription start site region 122279
D13Mit165 13 44215633 to 44215754 121 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 165
Tssr119529 13 44216191 to 44216226 35 + TSS region transcription start site region 119529
Gm47781 13 44232398 to 44239606 7208 + lincRNA gene predicted gene, 47781
Gm29676 13 44250092 to 44260123 10031 - lincRNA gene predicted gene, 29676
D13Mit49 13 44322063 to 44322211 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 49
Gm33958 13 44363836 to 44391117 27281 - lincRNA gene predicted gene, 33958
Gm27007 13 44400436 to 44455303 54867 - lincRNA gene predicted gene, 27007
Gm27036 13 44438834 to 44439813 979 - pseudogene predicted gene, 27036
Tssr119530 13 44439722 to 44439732 10 + TSS region transcription start site region 119530
1700029N11Rik 13 44439727 to 44457567 17840 + lincRNA gene RIKEN cDNA 1700029N11 gene
Tssr122280 13 44455305 to 44455324 19 - TSS region transcription start site region 122280
Gm34020 13 44467020 to 44470727 3707 - lncRNA gene predicted gene, 34020
Tssr119531 13 44467496 to 44467499 3 + TSS region transcription start site region 119531
Gm34084 13 44472417 to 44480319 7902 - lincRNA gene predicted gene, 34084
Tssr122281 13 44477051 to 44477060 9 - TSS region transcription start site region 122281
Tssr122282 13 44480306 to 44480309 3 - TSS region transcription start site region 122282
Tssr122283 13 44480319 to 44480333 14 - TSS region transcription start site region 122283
D13Sfk1 13 44483360 to 44483506 146 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 1
Gm40930 13 44504628 to 44508705 4077 + lncRNA gene predicted gene, 40930
Gm47792 13 44509558 to 44511037 1479 + lincRNA gene predicted gene, 47792
Tssr4057 13 44528869 to 44528871 2 + TSS region transcription start site region 4057
Cpgi5524 13 44535481 to 44535711 230 CpG island CpG island 5524