Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:4396651-5211485

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akr1c6 13 4434311 to 4457530 23219 + protein coding gene aldo-keto reductase family 1, member C6
Tssr118224 13 4434337 to 4434388 51 + TSS region transcription start site region 118224
Tssr118225 13 4436094 to 4436132 38 + TSS region transcription start site region 118225
Tssr118226 13 4439400 to 4439408 8 + TSS region transcription start site region 118226
Gm48010 13 4465680 to 4466566 886 - lincRNA gene predicted gene, 48010
Akr1c20 13 4486849 to 4523345 36496 - protein coding gene aldo-keto reductase family 1, member C20
Tssr121304 13 4523322 to 4523355 33 - TSS region transcription start site region 121304
Gm40657 13 4555411 to 4565781 10370 - lncRNA gene predicted gene, 40657
Tssr118227 13 4574075 to 4574088 13 + TSS region transcription start site region 118227
Akr1c21 13 4574075 to 4586541 12466 + protein coding gene aldo-keto reductase family 1, member C21
Akr1e1 13 4592490 to 4609164 16674 - protein coding gene aldo-keto reductase family 1, member E1
Tssr121305 13 4609122 to 4609189 67 - TSS region transcription start site region 121305
Tssr118228 13 4614126 to 4614127 1 + TSS region transcription start site region 118228
Rpl29-ps2 13 4614127 to 4614793 666 + pseudogene ribosomal protein L29, pseudogene 2
Tssr118229 13 4725579 to 4725594 15 + TSS region transcription start site region 118229
Gm40658 13 4725779 to 4745537 19758 + lincRNA gene predicted gene, 40658
Tssr121306 13 4756400 to 4756425 25 - TSS region transcription start site region 121306
Gm5444 13 4771651 to 4836485 64834 + lincRNA gene predicted gene 5444
Gm47450 13 4915714 to 4943052 27338 - lincRNA gene predicted gene, 47450
D13Mit158 13 4934018 to 4934159 141 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 158
Tssr118230 13 5155187 to 5155192 5 + TSS region transcription start site region 118230
Gm24790 13 5189803 to 5189934 131 - snoRNA gene predicted gene, 24790