Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:43767028-44424960

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit19 13 43767657 to 43767806 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 19
Cpgi5521 13 43784751 to 43785758 1007 CpG island CpG island 5521
Cd83 13 43785112 to 43803133 18021 + protein coding gene CD83 antigen
Tssr119516 13 43785140 to 43785160 20 + TSS region transcription start site region 119516
Tssr119517 13 43785168 to 43785203 35 + TSS region transcription start site region 119517
Tssr122276 13 43789076 to 43789093 17 - TSS region transcription start site region 122276
Tssr119518 13 43791029 to 43791053 24 + TSS region transcription start site region 119518
Tssr119519 13 43797599 to 43797618 19 + TSS region transcription start site region 119519
Tssr119520 13 43797884 to 43797897 13 + TSS region transcription start site region 119520
Tssr119521 13 43804927 to 43804935 8 + TSS region transcription start site region 119521
Gm33115 13 43842453 to 43846157 3704 + lincRNA gene predicted gene, 33115
Cpgi5522 13 43864338 to 43865367 1029 CpG island CpG island 5522
Gm33195 13 43864669 to 43868589 3920 + lincRNA gene predicted gene, 33195
Gm23117 13 43872802 to 43872909 107 + snRNA gene predicted gene, 23117
Tssr122277 13 43923877 to 43923886 9 - TSS region transcription start site region 122277
Tssr119522 13 43948837 to 43948840 3 + TSS region transcription start site region 119522
Gm2233 13 43948879 to 43952699 3820 + lincRNA gene predicted gene 2233
Tssr119523 13 43962204 to 43962226 22 + TSS region transcription start site region 119523
Tssr119524 13 43962245 to 43962281 36 + TSS region transcription start site region 119524
Tssr119525 13 43974921 to 43974928 7 + TSS region transcription start site region 119525
D13Mit243 13 43985062 to 43985164 102 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 243
A430062P19Rik 13 43990996 to 43992794 1798 unclassified gene RIKEN cDNA A430062P19 gene
D13Mit164 13 43995190 to 43995307 117 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 164
Gm33489 13 44010592 to 44018522 7930 - lincRNA gene predicted gene, 33489
Tssr122278 13 44018572 to 44018604 32 - TSS region transcription start site region 122278
Gm33630 13 44092028 to 44099960 7932 - lincRNA gene predicted gene, 33630
Gm5083 13 44121167 to 44125179 4012 + lincRNA gene predicted gene 5083
Tssr119526 13 44121294 to 44121322 28 + TSS region transcription start site region 119526
Cpgi5523 13 44139100 to 44139328 228 CpG island CpG island 5523
Gm33684 13 44150595 to 44151953 1358 + lincRNA gene predicted gene, 33684
A330076C08Rik 13 44193589 to 44216487 22898 - lincRNA gene RIKEN cDNA A330076C08 gene
Tssr119527 13 44197057 to 44197062 5 + TSS region transcription start site region 119527
Tssr119528 13 44197073 to 44197081 8 + TSS region transcription start site region 119528
Tssr122279 13 44197458 to 44197469 11 - TSS region transcription start site region 122279
D13Mit165 13 44215633 to 44215754 121 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 165
Tssr119529 13 44216191 to 44216226 35 + TSS region transcription start site region 119529
Gm47781 13 44232398 to 44239606 7208 + lincRNA gene predicted gene, 47781
Gm29676 13 44250092 to 44260123 10031 - lincRNA gene predicted gene, 29676
D13Mit49 13 44322063 to 44322211 148 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 49
Gm33958 13 44363836 to 44391117 27281 - lincRNA gene predicted gene, 33958
Gm27007 13 44400436 to 44455303 54867 - lincRNA gene predicted gene, 27007