MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:4194357-4364373

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Akr1c13	13	4191166 to 4205604	14438	+	protein coding gene	aldo-keto reductase family 1, member C13
D13Mit235	13	4220992 to 4221137	145		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 235
n-TKctt6	13	4224148 to 4224220	72	-	tRNA gene	nuclear encoded tRNA lysine 6 (anticodon CTT)
Tssr118220	13	4228682 to 4228727	45	+	TSS region	transcription start site region 118220
Akr1c19	13	4233503 to 4248361	14858	+	protein coding gene	aldo-keto reductase family 1, member C19
Tssr118221	13	4233730 to 4233758	28	+	TSS region	transcription start site region 118221
Tssr118222	13	4233786 to 4233797	11	+	TSS region	transcription start site region 118222
Marcksl1-ps4	13	4248735 to 4249025	290	+	pseudogene	MARCKS-like 1, pseudogene 4
Tssr118223	13	4249705 to 4249709	4	+	TSS region	transcription start site region 118223
Gm40656	13	4255171 to 4258461	3290	+	lncRNA gene	predicted gene, 40656
Akr1c12	13	4268172 to 4279399	11227	-	protein coding gene	aldo-keto reductase family 1, member C12
Tssr121299	13	4279336 to 4279353	17	-	TSS region	transcription start site region 121299
Tssr121300	13	4279357 to 4279373	16	-	TSS region	transcription start site region 121300
Tssr121301	13	4279390 to 4279409	19	-	TSS region	transcription start site region 121301
Tssr121302	13	4279420 to 4279450	30	-	TSS region	transcription start site region 121302
Hpi1	13	4364026 to 52947604	48583578		QTL	hapatic PMN infiltration 1
D13Mit236	13	4364026 to 4364122	96		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 236