Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:40633885-40733896

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47041 13 40642607 to 40644649 2042 - unclassified gene predicted gene, 47041
Tssr122149 13 40683885 to 40683896 11 - TSS region transcription start site region 122149
Cpgi5477 13 40702730 to 40703078 348 CpG island CpG island 5477
Cpgi5478 13 40703947 to 40704533 586 CpG island CpG island 5478
Gm9979 13 40704005 to 40707949 3944 + lincRNA gene predicted gene 9979
Cpgi5479 13 40704874 to 40705473 599 CpG island CpG island 5479
Cpgi5480 13 40708911 to 40709299 388 CpG island CpG island 5480
Tfap2a 13 40715302 to 40738237 22935 - protein coding gene transcription factor AP-2, alpha
Cpgi5481 13 40716816 to 40717259 443 CpG island CpG island 5481
Tssr119370 13 40717137 to 40717147 10 + TSS region transcription start site region 119370
Cpgi5482 13 40722739 to 40723547 808 CpG island CpG island 5482
Gm47061 13 40723110 to 40725449 2339 + antisense lncRNA gene predicted gene, 47061
Tssr122150 13 40725186 to 40725215 29 - TSS region transcription start site region 122150
Tssr122151 13 40725826 to 40725831 5 - TSS region transcription start site region 122151
Tssr122152 13 40726912 to 40726913 1 - TSS region transcription start site region 122152
Gm26688 13 40727808 to 40735162 7354 + antisense lncRNA gene predicted gene, 26688
Cpgi5483 13 40728164 to 40728890 726 CpG island CpG island 5483
Tssr122153 13 40728941 to 40728945 4 - TSS region transcription start site region 122153
Cpgi5484 13 40729635 to 40731955 2320 CpG island CpG island 5484
Tssr122154 13 40730096 to 40730100 4 - TSS region transcription start site region 122154
Tssr122155 13 40730416 to 40730429 13 - TSS region transcription start site region 122155
Tssr122156 13 40730731 to 40730739 8 - TSS region transcription start site region 122156
Tssr122157 13 40730750 to 40730762 12 - TSS region transcription start site region 122157
Tssr122158 13 40730781 to 40730798 17 - TSS region transcription start site region 122158
Tssr122159 13 40730820 to 40730825 5 - TSS region transcription start site region 122159
Tssr122160 13 40730867 to 40730879 12 - TSS region transcription start site region 122160
Tssr122161 13 40730995 to 40731029 34 - TSS region transcription start site region 122161
Tssr122162 13 40731044 to 40731055 11 - TSS region transcription start site region 122162
Tssr122163 13 40731592 to 40731632 40 - TSS region transcription start site region 122163
Tssr122164 13 40731661 to 40731670 9 - TSS region transcription start site region 122164
Cpgi5485 13 40732766 to 40733159 393 CpG island CpG island 5485
Cpgi5486 13 40733451 to 40734871 1420 CpG island CpG island 5486
Tssr122165 13 40733768 to 40733836 68 - TSS region transcription start site region 122165