Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:40378321-40728326

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5476 13 40461871 to 40462028 157 CpG island CpG island 5476
Gm8352 13 40496254 to 40497473 1219 + pseudogene predicted gene 8352
Gm47038 13 40533570 to 40533947 377 + pseudogene predicted gene, 47038
Tssr119368 13 40545563 to 40545564 1 + TSS region transcription start site region 119368
Tssr119369 13 40553321 to 40553326 5 + TSS region transcription start site region 119369
Gm47039 13 40559320 to 40606479 47159 - lincRNA gene predicted gene, 47039
Gm47041 13 40642607 to 40644649 2042 - unclassified gene predicted gene, 47041
Tssr122149 13 40683885 to 40683896 11 - TSS region transcription start site region 122149
Cpgi5477 13 40702730 to 40703078 348 CpG island CpG island 5477
Cpgi5478 13 40703947 to 40704533 586 CpG island CpG island 5478
Gm9979 13 40704005 to 40707949 3944 + lincRNA gene predicted gene 9979
Cpgi5479 13 40704874 to 40705473 599 CpG island CpG island 5479
Cpgi5480 13 40708911 to 40709299 388 CpG island CpG island 5480
Tfap2a 13 40715302 to 40738237 22935 - protein coding gene transcription factor AP-2, alpha
Cpgi5481 13 40716816 to 40717259 443 CpG island CpG island 5481
Tssr119370 13 40717137 to 40717147 10 + TSS region transcription start site region 119370
Cpgi5482 13 40722739 to 40723547 808 CpG island CpG island 5482
Gm47061 13 40723110 to 40725449 2339 + antisense lncRNA gene predicted gene, 47061
Tssr122150 13 40725186 to 40725215 29 - TSS region transcription start site region 122150
Tssr122151 13 40725826 to 40725831 5 - TSS region transcription start site region 122151
Tssr122152 13 40726912 to 40726913 1 - TSS region transcription start site region 122152
Gm26688 13 40727808 to 40735162 7354 + antisense lncRNA gene predicted gene, 26688
Cpgi5483 13 40728164 to 40728890 726 CpG island CpG island 5483