Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Mcsq4 | 13 | 21451000 | QTL | methacholine sensitivity QTL 4, final | ||
Gm47352 | 13 | 127916 | + | lincRNA gene | predicted gene, 47352 | |
Gm32243 | 13 | 29579 | - | lincRNA gene | predicted gene, 32243 | |
Gm5195 | 13 | 659 | + | pseudogene | predicted gene 5195 | |
Gm40923 | 13 | 19594 | - | lincRNA gene | predicted gene, 40923 | |
Gm46393 | 13 | 3489 | + | lncRNA gene | predicted gene, 46393 | |
Gm47361 | 13 | 623 | + | pseudogene | predicted gene, 47361 | |
Gm46394 | 13 | 2845 | - | lncRNA gene | predicted gene, 46394 | |
A230103O09Rik | 13 | 7634 | + | unclassified non-coding RNA gene | RIKEN cDNA A230103O09 gene | |
Tssr119366 | 13 | 38 | + | TSS region | transcription start site region 119366 | |
Cpgi5474 | 13 | 200 | CpG island | CpG island 5474 | ||
Gm23972 | 13 | 164 | - | snRNA gene | predicted gene, 23972 | |
Gm47316 | 13 | 7346 | - | lincRNA gene | predicted gene, 47316 | |
Tssr122148 | 13 | 12 | - | TSS region | transcription start site region 122148 | |
Gm40924 | 13 | 10345 | - | lncRNA gene | predicted gene, 40924 | |
Ofcc1 | 13 | 286129 | - | protein coding gene | orofacial cleft 1 candidate 1 | |
Tssr119367 | 13 | 9 | + | TSS region | transcription start site region 119367 | |
Cpgi5475 | 13 | 162 | CpG island | CpG island 5475 | ||
Cpgi5476 | 13 | 157 | CpG island | CpG island 5476 | ||
Gm8352 | 13 | 1219 | + | pseudogene | predicted gene 8352 | |
Gm47038 | 13 | 377 | + | pseudogene | predicted gene, 47038 | |
Tssr119368 | 13 | 1 | + | TSS region | transcription start site region 119368 | |
Tssr119369 | 13 | 5 | + | TSS region | transcription start site region 119369 | |
Gm47039 | 13 | 47159 | - | lincRNA gene | predicted gene, 47039 | |
Gm47041 | 13 | 2042 | - | unclassified gene | predicted gene, 47041 | |
Tssr122149 | 13 | 11 | - | TSS region | transcription start site region 122149 | |
Cpgi5477 | 13 | 348 | CpG island | CpG island 5477 | ||
Cpgi5478 | 13 | 586 | CpG island | CpG island 5478 | ||
Gm9979 | 13 | 3944 | + | lincRNA gene | predicted gene 9979 | |
Cpgi5479 | 13 | 599 | CpG island | CpG island 5479 | ||
Cpgi5480 | 13 | 388 | CpG island | CpG island 5480 | ||
Tfap2a | 13 | 22935 | - | protein coding gene | transcription factor AP-2, alpha | |
Cpgi5481 | 13 | 443 | CpG island | CpG island 5481 | ||
Tssr119370 | 13 | 10 | + | TSS region | transcription start site region 119370 | |
Cpgi5482 | 13 | 808 | CpG island | CpG island 5482 | ||
Gm47061 | 13 | 2339 | + | antisense lncRNA gene | predicted gene, 47061 | |
Tssr122150 | 13 | 29 | - | TSS region | transcription start site region 122150 | |
Tssr122151 | 13 | 5 | - | TSS region | transcription start site region 122151 | |
Tssr122152 | 13 | 1 | - | TSS region | transcription start site region 122152 | |
Gm26688 | 13 | 7354 | + | antisense lncRNA gene | predicted gene, 26688 | |
Cpgi5483 | 13 | 726 | CpG island | CpG island 5483 | ||
Tssr122153 | 13 | 4 | - | TSS region | transcription start site region 122153 | |
Cpgi5484 | 13 | 2320 | CpG island | CpG island 5484 | ||
Tssr122154 | 13 | 4 | - | TSS region | transcription start site region 122154 | |
Tssr122155 | 13 | 13 | - | TSS region | transcription start site region 122155 | |
Tssr122156 | 13 | 8 | - | TSS region | transcription start site region 122156 | |
Tssr122157 | 13 | 12 | - | TSS region | transcription start site region 122157 | |
Tssr122158 | 13 | 17 | - | TSS region | transcription start site region 122158 | |
Tssr122159 | 13 | 5 | - | TSS region | transcription start site region 122159 | |
Tssr122160 | 13 | 12 | - | TSS region | transcription start site region 122160 | |
Tssr122161 | 13 | 34 | - | TSS region | transcription start site region 122161 | |
Tssr122162 | 13 | 11 | - | TSS region | transcription start site region 122162 | |
Tssr122163 | 13 | 40 | - | TSS region | transcription start site region 122163 | |
Tssr122164 | 13 | 9 | - | TSS region | transcription start site region 122164 | |
Cpgi5485 | 13 | 393 | CpG island | CpG island 5485 | ||
Cpgi5486 | 13 | 1420 | CpG island | CpG island 5486 | ||
Tssr122165 | 13 | 68 | - | TSS region | transcription start site region 122165 | |
Tssr122166 | 13 | 23 | - | TSS region | transcription start site region 122166 | |
Tssr119371 | 13 | 6 | + | TSS region | transcription start site region 119371 | |
Cpgi5487 | 13 | 231 | CpG island | CpG island 5487 | ||
Gm47067 | 13 | 1453 | + | antisense lncRNA gene | predicted gene, 47067 | |
Cpgi5488 | 13 | 508 | CpG island | CpG island 5488 | ||
Tssr122167 | 13 | 10 | - | TSS region | transcription start site region 122167 | |
Tssr122168 | 13 | 13 | - | TSS region | transcription start site region 122168 | |
Cpgi5489 | 13 | 271 | CpG island | CpG island 5489 | ||
Cpgi5490 | 13 | 335 | CpG island | CpG island 5490 | ||
Cpgi5491 | 13 | 511 | CpG island | CpG island 5491 | ||
Gm48107 | 13 | 936 | - | lincRNA gene | predicted gene, 48107 | |
Gm6245 | 13 | 764 | + | pseudogene | predicted gene 6245 | |
Gm7201 | 13 | 7859 | - | pseudogene | predicted gene 7201 | |
Gm35160 | 13 | 815 | + | protein coding gene | predicted gene, 35160 | |
Gcnt2 | 13 | 101124 | + | protein coding gene | glucosaminyl (N-acetyl) transferase 2, I-branching enzyme | |
Tssr119372 | 13 | 14 | + | TSS region | transcription start site region 119372 | |
Tssr119373 | 13 | 62 | + | TSS region | transcription start site region 119373 | |
Tssr119374 | 13 | 15 | + | TSS region | transcription start site region 119374 | |
Tssr119375 | 13 | 31 | + | TSS region | transcription start site region 119375 | |
Tssr119376 | 13 | 33 | + | TSS region | transcription start site region 119376 | |
Mir5124a | 13 | 71 | + | miRNA gene | microRNA 5124a | |
Gm48192 | 13 | 691 | - | unclassified gene | predicted gene, 48192 | |
Tssr119377 | 13 | 21 | + | TSS region | transcription start site region 119377 | |
Tssr119378 | 13 | 7 | + | TSS region | transcription start site region 119378 | |
Tssr119379 | 13 | 23 | + | TSS region | transcription start site region 119379 | |
Tssr119380 | 13 | 18 | + | TSS region | transcription start site region 119380 | |
Tssr119381 | 13 | 17 | + | TSS region | transcription start site region 119381 | |
Tssr122169 | 13 | 13 | - | TSS region | transcription start site region 122169 | |
Gm31683 | 13 | 10563 | - | antisense lncRNA gene | predicted gene, 31683 | |
Gm48188 | 13 | 703 | - | pseudogene | predicted gene, 48188 | |
D13Mit61 | 13 | 163 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 61 | ||
Cpgi5492 | 13 | 666 | CpG island | CpG island 5492 | ||
Tssr119382 | 13 | 31 | + | TSS region | transcription start site region 119382 | |
Tssr119383 | 13 | 10 | + | TSS region | transcription start site region 119383 | |
Tssr119384 | 13 | 12 | + | TSS region | transcription start site region 119384 | |
Tssr119385 | 13 | 8 | + | TSS region | transcription start site region 119385 | |
A730081D07Rik | 13 | 32176 | - | antisense lncRNA gene | RIKEN cDNA A730081D07 gene | |
Tssr119386 | 13 | 13 | + | TSS region | transcription start site region 119386 | |
5530402G07Rik | 13 | 742 | - | unclassified gene | RIKEN cDNA 5530402G07 gene | |
Tssr122170 | 13 | 11 | - | TSS region | transcription start site region 122170 | |
Tssr119387 | 13 | 8 | + | TSS region | transcription start site region 119387 | |
Tssr122171 | 13 | 4 | - | TSS region | transcription start site region 122171 | |
Cpgi5493 | 13 | 1190 | CpG island | CpG island 5493 | ||
Tssr122172 | 13 | 26 | - | TSS region | transcription start site region 122172 | |
Tssr119388 | 13 | 50 | + | TSS region | transcription start site region 119388 | |
Pak1ip1 | 13 | 11992 | + | protein coding gene | PAK1 interacting protein 1 | |
Tssr122173 | 13 | 19 | - | TSS region | transcription start site region 122173 | |
Tssr119389 | 13 | 17 | + | TSS region | transcription start site region 119389 | |
Tssr119390 | 13 | 47 | + | TSS region | transcription start site region 119390 | |
Tssr119391 | 13 | 20 | + | TSS region | transcription start site region 119391 | |
Cpgi5494 | 13 | 732 | CpG island | CpG island 5494 | ||
Tssr119392 | 13 | 34 | + | TSS region | transcription start site region 119392 | |
Tmem14c | 13 | 6294 | + | protein coding gene | transmembrane protein 14C | |
Tssr119393 | 13 | 12 | + | TSS region | transcription start site region 119393 | |
Mak | 13 | 54698 | - | protein coding gene | male germ cell-associated kinase | |
Tssr122174 | 13 | 22 | - | TSS region | transcription start site region 122174 | |
Tssr122175 | 13 | 36 | - | TSS region | transcription start site region 122175 | |
Cpgi5495 | 13 | 641 | CpG island | CpG island 5495 | ||
Tssr122176 | 13 | 11 | - | TSS region | transcription start site region 122176 | |
Tssr122177 | 13 | 22 | - | TSS region | transcription start site region 122177 | |
Tssr122178 | 13 | 34 | - | TSS region | transcription start site region 122178 | |
Gm48344 | 13 | 293 | + | pseudogene | predicted gene, 48344 | |
Gcm2 | 13 | 9608 | - | protein coding gene | glial cells missing homolog 2 | |
Cpgi5496 | 13 | 267 | CpG island | CpG island 5496 | ||
Sycp2l | 13 | 59932 | + | protein coding gene | synaptonemal complex protein 2-like | |
Tssr4049 | 13 | 10 | - | TSS region | transcription start site region 4049 | |
Gm48510 | 13 | 2142 | + | lincRNA gene | predicted gene, 48510 | |
Elovl2 | 13 | 38021 | - | protein coding gene | elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 | |
Tssr122179 | 13 | 7 | - | TSS region | transcription start site region 122179 | |
Tssr122180 | 13 | 4 | - | TSS region | transcription start site region 122180 | |
Tssr122181 | 13 | 10 | - | TSS region | transcription start site region 122181 | |
Tssr122182 | 13 | 13 | - | TSS region | transcription start site region 122182 | |
Tssr122183 | 13 | 12 | - | TSS region | transcription start site region 122183 | |
Tssr122184 | 13 | 3 | - | TSS region | transcription start site region 122184 | |
Tssr122185 | 13 | 11 | - | TSS region | transcription start site region 122185 | |
Tssr122186 | 13 | 11 | - | TSS region | transcription start site region 122186 | |
Tssr122187 | 13 | 4 | - | TSS region | transcription start site region 122187 | |
Tssr122188 | 13 | 4 | - | TSS region | transcription start site region 122188 | |
Cpgi5497 | 13 | 1221 | CpG island | CpG island 5497 | ||
Tssr122189 | 13 | 20 | - | TSS region | transcription start site region 122189 | |
Tssr122190 | 13 | 24 | - | TSS region | transcription start site region 122190 | |
Tssr122191 | 13 | 11 | - | TSS region | transcription start site region 122191 | |
Tssr122192 | 13 | 17 | - | TSS region | transcription start site region 122192 | |
Cpgi5498 | 13 | 222 | CpG island | CpG island 5498 | ||
Rps17-ps1 | 13 | 383 | - | pseudogene | ribosomal protein S17, pseudogene 1 | |
Tssr122193 | 13 | 5 | - | TSS region | transcription start site region 122193 | |
Tssr119394 | 13 | 44 | + | TSS region | transcription start site region 119394 | |
Tssr119395 | 13 | 11 | + | TSS region | transcription start site region 119395 | |
Tssr119396 | 13 | 17 | + | TSS region | transcription start site region 119396 | |
Tssr119397 | 13 | 12 | + | TSS region | transcription start site region 119397 | |
Gm32063 | 13 | 5133 | + | lincRNA gene | predicted gene, 32063 | |
Cpgi5499 | 13 | 1175 | CpG island | CpG island 5499 | ||
Tssr119398 | 13 | 21 | + | TSS region | transcription start site region 119398 | |
Tssr119399 | 13 | 26 | + | TSS region | transcription start site region 119399 | |
Tssr119400 | 13 | 22 | + | TSS region | transcription start site region 119400 | |
Smim13 | 13 | 26733 | + | protein coding gene | small integral membrane protein 13 | |
Tssr119401 | 13 | 74 | + | TSS region | transcription start site region 119401 | |
Tssr119402 | 13 | 13 | + | TSS region | transcription start site region 119402 | |
Tssr119403 | 13 | 83 | + | TSS region | transcription start site region 119403 | |
Tssr119404 | 13 | 2 | + | TSS region | transcription start site region 119404 | |
Gm17364 | 13 | 174 | - | protein coding gene | predicted gene, 17364 | |
D13Mit89 | 13 | 128 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 89 | ||
D13Mit62 | 13 | 173 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 62 | ||
Nedd9 | 13 | 177444 | - | protein coding gene | neural precursor cell expressed, developmentally down-regulated gene 9 | |
Cpgi5500 | 13 | 612 | CpG island | CpG island 5500 | ||
Tssr122194 | 13 | 16 | - | TSS region | transcription start site region 122194 | |
Tssr122195 | 13 | 4 | - | TSS region | transcription start site region 122195 | |
Gm26877 | 13 | 10937 | + | antisense lncRNA gene | predicted gene, 26877 | |
Gm48571 | 13 | 4769 | + | antisense lncRNA gene | predicted gene, 48571 | |
Tssr4050 | 13 | 6 | - | TSS region | transcription start site region 4050 | |
A130026F07Rik | 13 | 2073 | unclassified gene | RIKEN cDNA A130026F07 gene | ||
Gm48570 | 13 | 1062 | + | antisense lncRNA gene | predicted gene, 48570 | |
Gm32448 | 13 | 3798 | + | lncRNA gene | predicted gene, 32448 | |
Tssr122196 | 13 | 16 | - | TSS region | transcription start site region 122196 | |
Tssr122197 | 13 | 14 | - | TSS region | transcription start site region 122197 | |
Tssr122198 | 13 | 53 | - | TSS region | transcription start site region 122198 | |
Tssr122199 | 13 | 19 | - | TSS region | transcription start site region 122199 | |
Tssr122200 | 13 | 38 | - | TSS region | transcription start site region 122200 | |
Tssr122201 | 13 | 16 | - | TSS region | transcription start site region 122201 | |
Tssr122202 | 13 | 13 | - | TSS region | transcription start site region 122202 | |
Tssr122203 | 13 | 14 | - | TSS region | transcription start site region 122203 | |
D13Mit118 | 13 | 147 | DNA segment | DNA segment, Chr 13, Massachusetts Institute of Technology 118 | ||
Tssr4051 | 13 | 4 | - | TSS region | transcription start site region 4051 | |
Tssr119405 | 13 | 8 | + | TSS region | transcription start site region 119405 | |
Tssr119406 | 13 | 1 | + | TSS region | transcription start site region 119406 | |
Tssr122204 | 13 | 34 | - | TSS region | transcription start site region 122204 | |
Tssr119407 | 13 | 12 | + | TSS region | transcription start site region 119407 | |
Tssr4052 | 13 | 7 | + | TSS region | transcription start site region 4052 | |
Gm48569 | 13 | 1374 | - | unclassified gene | predicted gene, 48569 | |
Gm32401 | 13 | 38438 | + | antisense lncRNA gene | predicted gene, 32401 | |
Tssr122205 | 13 | 9 | - | TSS region | transcription start site region 122205 | |
Tssr122206 | 13 | 33 | - | TSS region | transcription start site region 122206 | |
Tssr119408 | 13 | 45 | + | TSS region | transcription start site region 119408 | |
Tssr119409 | 13 | 29 | + | TSS region | transcription start site region 119409 | |
Tssr122207 | 13 | 17 | - | TSS region | transcription start site region 122207 | |
Tssr122208 | 13 | 40 | - | TSS region | transcription start site region 122208 | |
Tssr122209 | 13 | 17 | - | TSS region | transcription start site region 122209 | |
Gm32184 | 13 | 16908 | - | lincRNA gene | predicted gene, 32184 | |
Tssr4053 | 13 | 19 | - | TSS region | transcription start site region 4053 | |
Tssr119410 | 13 | 1 | + | TSS region | transcription start site region 119410 | |
Tssr119411 | 13 | 9 | + | TSS region | transcription start site region 119411 | |
Tssr4054 | 13 | 10 | + | TSS region | transcription start site region 4054 | |
Tssr4055 | 13 | 21 | + | TSS region | transcription start site region 4055 |