MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:39276790-40286384

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mcsq4	13	18322000 to 39773000	21451000		QTL	methacholine sensitivity QTL 4, final
Gm47348	13	39440565 to 39449671	9106	+	lincRNA gene	predicted gene, 47348
Gm3509	13	39463227 to 39467017	3790	-	lincRNA gene	predicted gene 3509
Gm47349	13	39467347 to 39470134	2787	+	lincRNA gene	predicted gene, 47349
Gm47351	13	39530598 to 39533103	2505	-	lincRNA gene	predicted gene, 47351
Gm47352	13	39571583 to 39699499	127916	+	lincRNA gene	predicted gene, 47352
Gm32243	13	39617668 to 39647247	29579	-	lincRNA gene	predicted gene, 32243
Gm5195	13	39757308 to 39757967	659	+	pseudogene	predicted gene 5195
Gm40923	13	39771790 to 39791384	19594	-	lincRNA gene	predicted gene, 40923
Gm46393	13	39791448 to 39794937	3489	+	lncRNA gene	predicted gene, 46393
Gm47361	13	39796321 to 39796944	623	+	pseudogene	predicted gene, 47361
Gm46394	13	39803393 to 39806238	2845	-	lncRNA gene	predicted gene, 46394
A230103O09Rik	13	39823418 to 39831052	7634	+	unclassified non-coding RNA gene	RIKEN cDNA A230103O09 gene
Tssr119366	13	39824175 to 39824213	38	+	TSS region	transcription start site region 119366
Cpgi5474	13	39824216 to 39824416	200		CpG island	CpG island 5474
Gm23972	13	39858863 to 39859027	164	-	snRNA gene	predicted gene, 23972
Gm47316	13	39877035 to 39884381	7346	-	lincRNA gene	predicted gene, 47316
Tssr122148	13	39899287 to 39899299	12	-	TSS region	transcription start site region 122148
Gm40924	13	39912866 to 39923211	10345	-	lncRNA gene	predicted gene, 40924
Ofcc1	13	40001882 to 40288011	286129	-	protein coding gene	orofacial cleft 1 candidate 1