MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:38751730-39018237

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pbd2	13	17014923 to 38763430	21748507		QTL	peak bone density 2
D13Mit88	13	38763262 to 38763430	168		DNA segment	DNA segment, Chr 13, Massachusetts Institute of Technology 88
Gm47511	13	38775824 to 38777191	1367	+	lincRNA gene	predicted gene, 47511
Gm47509	13	38782161 to 38825755	43594	-	lincRNA gene	predicted gene, 47509
Gm46392	13	38861730 to 38908237	46507	+	lincRNA gene	predicted gene, 46392
Gm22035	13	38898360 to 38898587	227	-	unclassified non-coding RNA gene	predicted gene, 22035
Gm47530	13	38917153 to 38919219	2066	-	unclassified gene	predicted gene, 47530
Slc35b3	13	38932140 to 38960875	28735	-	protein coding gene	solute carrier family 35, member B3
Gm26514	13	38945543 to 38951313	5770	-	lincRNA gene	predicted gene, 26514
Cpgi5473	13	38960074 to 38960896	822		CpG island	CpG island 5473
Tssr122142	13	38960457 to 38960466	9	-	TSS region	transcription start site region 122142
Tssr122143	13	38960478 to 38960496	18	-	TSS region	transcription start site region 122143
Tssr122144	13	38960498 to 38960539	41	-	TSS region	transcription start site region 122144
Tssr122145	13	38960542 to 38960554	12	-	TSS region	transcription start site region 122145
5033403F01Rik	13	38960619 to 38966297	5678	+	antisense lncRNA gene	RIKEN cDNA 5033403F01 gene
Tssr122146	13	38960846 to 38960883	37	-	TSS region	transcription start site region 122146
Tssr122147	13	38967115 to 38967150	35	-	TSS region	transcription start site region 122147
D13Dcr8	13	38968409 to 38968505	96		DNA segment	DNA Segment, Chr 13, Derry C. Roopenian 8