Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:38603642-38847222

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pbd2 13 17014923 to 38763430 21748507 QTL peak bone density 2
Bloc1s5 13 38602706 to 38635876 33170 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 5, muted
Cpgi5471 13 38634494 to 38635329 835 CpG island CpG island 5471
Gm47400 13 38634971 to 38637116 2145 + antisense lncRNA gene predicted gene, 47400
Tssr122140 13 38635036 to 38635119 83 - TSS region transcription start site region 122140
Eef1e1 13 38645691 to 38659028 13337 - protein coding gene eukaryotic translation elongation factor 1 epsilon 1
Cpgi5472 13 38658522 to 38659261 739 CpG island CpG island 5472
Tssr122141 13 38658991 to 38659038 47 - TSS region transcription start site region 122141
D13Mit87 13 38671753 to 38671868 115 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 87
Gm6200 13 38674133 to 38674566 433 - pseudogene predicted gene 6200
D13Mit296 13 38711759 to 38711902 143 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology-296
Gm47510 13 38723642 to 38727222 3580 + lincRNA gene predicted gene, 47510
D13Mit88 13 38763262 to 38763430 168 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 88
Gm47511 13 38775824 to 38777191 1367 + lincRNA gene predicted gene, 47511
Gm47509 13 38782161 to 38825755 43594 - lincRNA gene predicted gene, 47509