Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:37942235-38132310

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rreb1 13 37778400 to 37952005 173605 + protein coding gene ras responsive element binding protein 1
Ssr1 13 37971401 to 37994236 22835 - protein coding gene signal sequence receptor, alpha
Tssr122116 13 37979511 to 37979529 18 - TSS region transcription start site region 122116
Tssr122117 13 37992099 to 37992116 17 - TSS region transcription start site region 122117
Cpgi5460 13 37993449 to 37994428 979 CpG island CpG island 5460
Tssr122118 13 37994052 to 37994060 8 - TSS region transcription start site region 122118
Tssr122119 13 37994075 to 37994091 16 - TSS region transcription start site region 122119
Tssr122120 13 37994111 to 37994184 73 - TSS region transcription start site region 122120
Cage1 13 38006052 to 38037019 30967 - protein coding gene cancer antigen 1
Tssr119341 13 38010802 to 38010842 40 + TSS region transcription start site region 119341
Tssr122121 13 38031900 to 38031935 35 - TSS region transcription start site region 122121
Tssr122122 13 38031944 to 38031951 7 - TSS region transcription start site region 122122
Cpgi5461 13 38036604 to 38037630 1026 CpG island CpG island 5461
Tssr122123 13 38036890 to 38036913 23 - TSS region transcription start site region 122123
Tssr122124 13 38036925 to 38036947 22 - TSS region transcription start site region 122124
Riok1 13 38036995 to 38061433 24438 + protein coding gene RIO kinase 1
Tssr122125 13 38037083 to 38037158 75 - TSS region transcription start site region 122125
Tssr122126 13 38037165 to 38037184 19 - TSS region transcription start site region 122126
Tssr119342 13 38037235 to 38037310 75 + TSS region transcription start site region 119342
Tssr122127 13 38037919 to 38037932 13 - TSS region transcription start site region 122127
Tssr122128 13 38037941 to 38037952 11 - TSS region transcription start site region 122128
Tssr122129 13 38037971 to 38037984 13 - TSS region transcription start site region 122129
Gm40920 13 38077059 to 38080465 3406 - lncRNA gene predicted gene, 40920
Gm27387 13 38086202 to 38086317 115 + miRNA gene predicted gene, 27387
Tssr4045 13 38108824 to 38108826 2 + TSS region transcription start site region 4045
Tssr122130 13 38109136 to 38109139 3 - TSS region transcription start site region 122130