Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:37936995-38161433

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rreb1 13 37778400 to 37952005 173605 + protein coding gene ras responsive element binding protein 1
Tssr119340 13 37936993 to 37937001 8 + TSS region transcription start site region 119340
Ssr1 13 37971401 to 37994236 22835 - protein coding gene signal sequence receptor, alpha
Tssr122116 13 37979511 to 37979529 18 - TSS region transcription start site region 122116
Tssr122117 13 37992099 to 37992116 17 - TSS region transcription start site region 122117
Cpgi5460 13 37993449 to 37994428 979 CpG island CpG island 5460
Tssr122118 13 37994052 to 37994060 8 - TSS region transcription start site region 122118
Tssr122119 13 37994075 to 37994091 16 - TSS region transcription start site region 122119
Tssr122120 13 37994111 to 37994184 73 - TSS region transcription start site region 122120
Cage1 13 38006052 to 38037019 30967 - protein coding gene cancer antigen 1
Tssr119341 13 38010802 to 38010842 40 + TSS region transcription start site region 119341
Tssr122121 13 38031900 to 38031935 35 - TSS region transcription start site region 122121
Tssr122122 13 38031944 to 38031951 7 - TSS region transcription start site region 122122
Cpgi5461 13 38036604 to 38037630 1026 CpG island CpG island 5461
Tssr122123 13 38036890 to 38036913 23 - TSS region transcription start site region 122123
Tssr122124 13 38036925 to 38036947 22 - TSS region transcription start site region 122124
Riok1 13 38036995 to 38061433 24438 + protein coding gene RIO kinase 1
Tssr122125 13 38037083 to 38037158 75 - TSS region transcription start site region 122125
Tssr122126 13 38037165 to 38037184 19 - TSS region transcription start site region 122126
Tssr119342 13 38037235 to 38037310 75 + TSS region transcription start site region 119342
Tssr122127 13 38037919 to 38037932 13 - TSS region transcription start site region 122127
Tssr122128 13 38037941 to 38037952 11 - TSS region transcription start site region 122128
Tssr122129 13 38037971 to 38037984 13 - TSS region transcription start site region 122129
Gm40920 13 38077059 to 38080465 3406 - lncRNA gene predicted gene, 40920
Gm27387 13 38086202 to 38086317 115 + miRNA gene predicted gene, 27387
Tssr4045 13 38108824 to 38108826 2 + TSS region transcription start site region 4045
Tssr122130 13 38109136 to 38109139 3 - TSS region transcription start site region 122130
Tssr119343 13 38149447 to 38149452 5 + TSS region transcription start site region 119343
Tssr119344 13 38149475 to 38149481 6 + TSS region transcription start site region 119344
Tssr119345 13 38149486 to 38149492 6 + TSS region transcription start site region 119345
Tssr119346 13 38149499 to 38149513 14 + TSS region transcription start site region 119346
Gm10129 13 38150477 to 38151792 1315 - protein coding gene predicted gene 10129
Cpgi5462 13 38151032 to 38153043 2011 CpG island CpG island 5462
Tssr119347 13 38151253 to 38151278 25 + TSS region transcription start site region 119347
Tssr119348 13 38151283 to 38151307 24 + TSS region transcription start site region 119348
Dsp 13 38151294 to 38198577 47283 + protein coding gene desmoplakin
Tssr119349 13 38151324 to 38151339 15 + TSS region transcription start site region 119349
Tssr119350 13 38151343 to 38151354 11 + TSS region transcription start site region 119350
Tssr119351 13 38151371 to 38151393 22 + TSS region transcription start site region 119351
Tssr119352 13 38151411 to 38151422 11 + TSS region transcription start site region 119352
Tssr119353 13 38151433 to 38151444 11 + TSS region transcription start site region 119353
Tssr119354 13 38151721 to 38151754 33 + TSS region transcription start site region 119354