Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:37821052-38222019

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rreb1 13 37778400 to 37952005 173605 + protein coding gene ras responsive element binding protein 1
Cpgi5457 13 37825123 to 37828042 2919 CpG island CpG island 5457
Tssr119316 13 37825847 to 37825873 26 + TSS region transcription start site region 119316
Tssr119317 13 37825994 to 37826003 9 + TSS region transcription start site region 119317
Tssr119318 13 37826018 to 37826044 26 + TSS region transcription start site region 119318
Tssr119319 13 37826056 to 37826081 25 + TSS region transcription start site region 119319
Tssr119320 13 37826225 to 37826250 25 + TSS region transcription start site region 119320
Tssr119321 13 37826617 to 37826706 89 + TSS region transcription start site region 119321
Tssr119322 13 37826792 to 37826804 12 + TSS region transcription start site region 119322
Tssr119323 13 37826815 to 37826832 17 + TSS region transcription start site region 119323
Tssr119324 13 37826904 to 37826949 45 + TSS region transcription start site region 119324
Tssr122115 13 37827222 to 37827253 31 - TSS region transcription start site region 122115
Tssr119325 13 37833819 to 37833843 24 + TSS region transcription start site region 119325
Tssr119326 13 37837627 to 37837666 39 + TSS region transcription start site region 119326
Tssr119327 13 37841610 to 37841658 48 + TSS region transcription start site region 119327
Tssr119328 13 37845854 to 37845883 29 + TSS region transcription start site region 119328
Tssr119329 13 37846339 to 37846350 11 + TSS region transcription start site region 119329
Tssr119330 13 37848707 to 37848716 9 + TSS region transcription start site region 119330
Tssr119331 13 37853469 to 37853473 4 + TSS region transcription start site region 119331
Tssr119332 13 37856872 to 37856876 4 + TSS region transcription start site region 119332
Cpgi5458 13 37857349 to 37858290 941 CpG island CpG island 5458
Tssr119333 13 37857414 to 37857421 7 + TSS region transcription start site region 119333
Tssr119334 13 37857961 to 37857992 31 + TSS region transcription start site region 119334
Tssr119335 13 37864909 to 37864920 11 + TSS region transcription start site region 119335
Tssr119336 13 37873041 to 37873042 1 + TSS region transcription start site region 119336
Tssr119337 13 37873431 to 37873472 41 + TSS region transcription start site region 119337
Tssr4044 13 37895421 to 37895425 4 + TSS region transcription start site region 4044
Tssr119338 13 37896560 to 37896566 6 + TSS region transcription start site region 119338
D13Ertd150e 13 37922812 to 37923025 213 DNA segment DNA segment, Chr 13, ERATO Doi 150, expressed
Tssr119339 13 37930214 to 37930241 27 + TSS region transcription start site region 119339
Cpgi5459 13 37930756 to 37931277 521 CpG island CpG island 5459
Tssr119340 13 37936993 to 37937001 8 + TSS region transcription start site region 119340
Ssr1 13 37971401 to 37994236 22835 - protein coding gene signal sequence receptor, alpha
Tssr122116 13 37979511 to 37979529 18 - TSS region transcription start site region 122116
Tssr122117 13 37992099 to 37992116 17 - TSS region transcription start site region 122117
Cpgi5460 13 37993449 to 37994428 979 CpG island CpG island 5460
Tssr122118 13 37994052 to 37994060 8 - TSS region transcription start site region 122118
Tssr122119 13 37994075 to 37994091 16 - TSS region transcription start site region 122119
Tssr122120 13 37994111 to 37994184 73 - TSS region transcription start site region 122120
Cage1 13 38006052 to 38037019 30967 - protein coding gene cancer antigen 1
Tssr119341 13 38010802 to 38010842 40 + TSS region transcription start site region 119341
Tssr122121 13 38031900 to 38031935 35 - TSS region transcription start site region 122121
Tssr122122 13 38031944 to 38031951 7 - TSS region transcription start site region 122122
Cpgi5461 13 38036604 to 38037630 1026 CpG island CpG island 5461
Tssr122123 13 38036890 to 38036913 23 - TSS region transcription start site region 122123
Tssr122124 13 38036925 to 38036947 22 - TSS region transcription start site region 122124
Riok1 13 38036995 to 38061433 24438 + protein coding gene RIO kinase 1
Tssr122125 13 38037083 to 38037158 75 - TSS region transcription start site region 122125
Tssr122126 13 38037165 to 38037184 19 - TSS region transcription start site region 122126
Tssr119342 13 38037235 to 38037310 75 + TSS region transcription start site region 119342
Tssr122127 13 38037919 to 38037932 13 - TSS region transcription start site region 122127
Tssr122128 13 38037941 to 38037952 11 - TSS region transcription start site region 122128
Tssr122129 13 38037971 to 38037984 13 - TSS region transcription start site region 122129
Gm40920 13 38077059 to 38080465 3406 - lncRNA gene predicted gene, 40920
Gm27387 13 38086202 to 38086317 115 + miRNA gene predicted gene, 27387
Tssr4045 13 38108824 to 38108826 2 + TSS region transcription start site region 4045
Tssr122130 13 38109136 to 38109139 3 - TSS region transcription start site region 122130
Tssr119343 13 38149447 to 38149452 5 + TSS region transcription start site region 119343
Tssr119344 13 38149475 to 38149481 6 + TSS region transcription start site region 119344
Tssr119345 13 38149486 to 38149492 6 + TSS region transcription start site region 119345
Tssr119346 13 38149499 to 38149513 14 + TSS region transcription start site region 119346
Gm10129 13 38150477 to 38151792 1315 - protein coding gene predicted gene 10129
Cpgi5462 13 38151032 to 38153043 2011 CpG island CpG island 5462
Tssr119347 13 38151253 to 38151278 25 + TSS region transcription start site region 119347
Tssr119348 13 38151283 to 38151307 24 + TSS region transcription start site region 119348
Dsp 13 38151294 to 38198577 47283 + protein coding gene desmoplakin
Tssr119349 13 38151324 to 38151339 15 + TSS region transcription start site region 119349
Tssr119350 13 38151343 to 38151354 11 + TSS region transcription start site region 119350
Tssr119351 13 38151371 to 38151393 22 + TSS region transcription start site region 119351
Tssr119352 13 38151411 to 38151422 11 + TSS region transcription start site region 119352
Tssr119353 13 38151433 to 38151444 11 + TSS region transcription start site region 119353
Tssr119354 13 38151721 to 38151754 33 + TSS region transcription start site region 119354
Cpgi5463 13 38164843 to 38165011 168 CpG island CpG island 5463
Tssr122131 13 38173844 to 38173874 30 - TSS region transcription start site region 122131
Tssr122132 13 38179080 to 38179093 13 - TSS region transcription start site region 122132
Tssr119355 13 38181172 to 38181185 13 + TSS region transcription start site region 119355
Tssr122133 13 38184012 to 38184067 55 - TSS region transcription start site region 122133
Tssr119356 13 38190432 to 38190443 11 + TSS region transcription start site region 119356
Tssr4046 13 38191790 to 38191806 16 - TSS region transcription start site region 4046
Tssr119357 13 38192547 to 38192560 13 + TSS region transcription start site region 119357
Cpgi5464 13 38194971 to 38195733 762 CpG island CpG island 5464
Cpgi5465 13 38197541 to 38197871 330 CpG island CpG island 5465
Cpgi5466 13 38204635 to 38205450 815 CpG island CpG island 5466
Tssr119358 13 38204928 to 38204962 34 + TSS region transcription start site region 119358
Snrnp48 13 38204938 to 38227665 22727 + protein coding gene small nuclear ribonucleoprotein 48 (U11/U12)
Tssr119359 13 38216474 to 38216490 16 + TSS region transcription start site region 119359