Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:37668041-38078042

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49350 13 37684925 to 37686425 1500 - lincRNA gene predicted gene, 49350
Gm40918 13 37692089 to 37717648 25559 - lincRNA gene predicted gene, 40918
Gm49351 13 37697306 to 37698158 852 - pseudogene predicted gene, 49351
Tssr119303 13 37700999 to 37701000 1 + TSS region transcription start site region 119303
Gm45936 13 37717382 to 37734742 17360 - lncRNA gene predicted gene, 45936
Tssr122112 13 37729823 to 37729830 7 - TSS region transcription start site region 122112
Tssr122113 13 37743869 to 37743870 1 - TSS region transcription start site region 122113
Gm31600 13 37761545 to 37767935 6390 + lincRNA gene predicted gene, 31600
Tssr122114 13 37769931 to 37769935 4 - TSS region transcription start site region 122114
Cpgi5456 13 37777906 to 37779132 1226 CpG island CpG island 5456
Tssr119304 13 37778384 to 37778403 19 + TSS region transcription start site region 119304
Rreb1 13 37778400 to 37952005 173605 + protein coding gene ras responsive element binding protein 1
Tssr119305 13 37778412 to 37778424 12 + TSS region transcription start site region 119305
Tssr119306 13 37778438 to 37778468 30 + TSS region transcription start site region 119306
Tssr119307 13 37778473 to 37778500 27 + TSS region transcription start site region 119307
Tssr119308 13 37778522 to 37778531 9 + TSS region transcription start site region 119308
Tssr119309 13 37787220 to 37787225 5 + TSS region transcription start site region 119309
Tssr119310 13 37788071 to 37788075 4 + TSS region transcription start site region 119310
Gm46411 13 37793382 to 37799790 6408 - antisense lncRNA gene predicted gene, 46411
Tssr119311 13 37801534 to 37801538 4 + TSS region transcription start site region 119311
Tssr119312 13 37802059 to 37802092 33 + TSS region transcription start site region 119312
Tssr119313 13 37803206 to 37803240 34 + TSS region transcription start site region 119313
Tssr119314 13 37806156 to 37806166 10 + TSS region transcription start site region 119314
Tssr119315 13 37809473 to 37809522 49 + TSS region transcription start site region 119315
Cpgi5457 13 37825123 to 37828042 2919 CpG island CpG island 5457
Tssr119316 13 37825847 to 37825873 26 + TSS region transcription start site region 119316
Tssr119317 13 37825994 to 37826003 9 + TSS region transcription start site region 119317
Tssr119318 13 37826018 to 37826044 26 + TSS region transcription start site region 119318
Tssr119319 13 37826056 to 37826081 25 + TSS region transcription start site region 119319
Tssr119320 13 37826225 to 37826250 25 + TSS region transcription start site region 119320
Tssr119321 13 37826617 to 37826706 89 + TSS region transcription start site region 119321
Tssr119322 13 37826792 to 37826804 12 + TSS region transcription start site region 119322
Tssr119323 13 37826815 to 37826832 17 + TSS region transcription start site region 119323
Tssr119324 13 37826904 to 37826949 45 + TSS region transcription start site region 119324
Tssr122115 13 37827222 to 37827253 31 - TSS region transcription start site region 122115
Tssr119325 13 37833819 to 37833843 24 + TSS region transcription start site region 119325
Tssr119326 13 37837627 to 37837666 39 + TSS region transcription start site region 119326
Tssr119327 13 37841610 to 37841658 48 + TSS region transcription start site region 119327
Tssr119328 13 37845854 to 37845883 29 + TSS region transcription start site region 119328
Tssr119329 13 37846339 to 37846350 11 + TSS region transcription start site region 119329
Tssr119330 13 37848707 to 37848716 9 + TSS region transcription start site region 119330
Tssr119331 13 37853469 to 37853473 4 + TSS region transcription start site region 119331
Tssr119332 13 37856872 to 37856876 4 + TSS region transcription start site region 119332
Cpgi5458 13 37857349 to 37858290 941 CpG island CpG island 5458
Tssr119333 13 37857414 to 37857421 7 + TSS region transcription start site region 119333
Tssr119334 13 37857961 to 37857992 31 + TSS region transcription start site region 119334
Tssr119335 13 37864909 to 37864920 11 + TSS region transcription start site region 119335
Tssr119336 13 37873041 to 37873042 1 + TSS region transcription start site region 119336
Tssr119337 13 37873431 to 37873472 41 + TSS region transcription start site region 119337
Tssr4044 13 37895421 to 37895425 4 + TSS region transcription start site region 4044
Tssr119338 13 37896560 to 37896566 6 + TSS region transcription start site region 119338
D13Ertd150e 13 37922812 to 37923025 213 DNA segment DNA segment, Chr 13, ERATO Doi 150, expressed
Tssr119339 13 37930214 to 37930241 27 + TSS region transcription start site region 119339
Cpgi5459 13 37930756 to 37931277 521 CpG island CpG island 5459
Tssr119340 13 37936993 to 37937001 8 + TSS region transcription start site region 119340
Ssr1 13 37971401 to 37994236 22835 - protein coding gene signal sequence receptor, alpha
Tssr122116 13 37979511 to 37979529 18 - TSS region transcription start site region 122116
Tssr122117 13 37992099 to 37992116 17 - TSS region transcription start site region 122117
Cpgi5460 13 37993449 to 37994428 979 CpG island CpG island 5460
Tssr122118 13 37994052 to 37994060 8 - TSS region transcription start site region 122118
Tssr122119 13 37994075 to 37994091 16 - TSS region transcription start site region 122119
Tssr122120 13 37994111 to 37994184 73 - TSS region transcription start site region 122120
Cage1 13 38006052 to 38037019 30967 - protein coding gene cancer antigen 1
Tssr119341 13 38010802 to 38010842 40 + TSS region transcription start site region 119341
Tssr122121 13 38031900 to 38031935 35 - TSS region transcription start site region 122121
Tssr122122 13 38031944 to 38031951 7 - TSS region transcription start site region 122122
Cpgi5461 13 38036604 to 38037630 1026 CpG island CpG island 5461
Tssr122123 13 38036890 to 38036913 23 - TSS region transcription start site region 122123
Tssr122124 13 38036925 to 38036947 22 - TSS region transcription start site region 122124
Riok1 13 38036995 to 38061433 24438 + protein coding gene RIO kinase 1
Tssr122125 13 38037083 to 38037158 75 - TSS region transcription start site region 122125
Tssr122126 13 38037165 to 38037184 19 - TSS region transcription start site region 122126
Tssr119342 13 38037235 to 38037310 75 + TSS region transcription start site region 119342
Tssr122127 13 38037919 to 38037932 13 - TSS region transcription start site region 122127
Tssr122128 13 38037941 to 38037952 11 - TSS region transcription start site region 122128
Tssr122129 13 38037971 to 38037984 13 - TSS region transcription start site region 122129
Gm40920 13 38077059 to 38080465 3406 - lncRNA gene predicted gene, 40920