Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:37543384-38013403

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lncbate6 13 37541357 to 37549725 8368 + lincRNA gene brown adipose tissue enriched long noncoding RNA 6
Gm47751 13 37561945 to 37564972 3027 - lincRNA gene predicted gene, 47751
Heal17 13 37562963 to 37563080 117 QTL wound healing/regeneration 17
D13Mit117 13 37562963 to 37563080 117 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 117
Tssr119297 13 37578393 to 37578394 1 + TSS region transcription start site region 119297
Tssr119298 13 37581058 to 37581110 52 + TSS region transcription start site region 119298
Gm47754 13 37581077 to 37589313 8236 + lincRNA gene predicted gene, 47754
Tssr119299 13 37581116 to 37581144 28 + TSS region transcription start site region 119299
Tssr119300 13 37581208 to 37581218 10 + TSS region transcription start site region 119300
Gm47753 13 37582271 to 37582564 293 + pseudogene predicted gene, 47753
Tssr119301 13 37598719 to 37598728 9 + TSS region transcription start site region 119301
Tssr119302 13 37598760 to 37598773 13 + TSS region transcription start site region 119302
Gm40915 13 37616964 to 37627603 10639 - lincRNA gene predicted gene, 40915
Gm40916 13 37633785 to 37643342 9557 - lincRNA gene predicted gene, 40916
Gm40917 13 37643905 to 37648099 4194 - lncRNA gene predicted gene, 40917
AI463229 13 37657022 to 37667734 10712 - lincRNA gene expressed sequence AI463229
Cpgi5455 13 37657338 to 37657614 276 CpG island CpG island 5455
D13Mit38 13 37666021 to 37666163 142 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 38
Gm49350 13 37684925 to 37686425 1500 - lincRNA gene predicted gene, 49350
Gm40918 13 37692089 to 37717648 25559 - lincRNA gene predicted gene, 40918
Gm49351 13 37697306 to 37698158 852 - pseudogene predicted gene, 49351
Tssr119303 13 37700999 to 37701000 1 + TSS region transcription start site region 119303
Gm45936 13 37717382 to 37734742 17360 - lncRNA gene predicted gene, 45936
Tssr122112 13 37729823 to 37729830 7 - TSS region transcription start site region 122112
Tssr122113 13 37743869 to 37743870 1 - TSS region transcription start site region 122113
Gm31600 13 37761545 to 37767935 6390 + lincRNA gene predicted gene, 31600
Tssr122114 13 37769931 to 37769935 4 - TSS region transcription start site region 122114
Cpgi5456 13 37777906 to 37779132 1226 CpG island CpG island 5456
Tssr119304 13 37778384 to 37778403 19 + TSS region transcription start site region 119304
Rreb1 13 37778400 to 37952005 173605 + protein coding gene ras responsive element binding protein 1
Tssr119305 13 37778412 to 37778424 12 + TSS region transcription start site region 119305
Tssr119306 13 37778438 to 37778468 30 + TSS region transcription start site region 119306
Tssr119307 13 37778473 to 37778500 27 + TSS region transcription start site region 119307
Tssr119308 13 37778522 to 37778531 9 + TSS region transcription start site region 119308
Tssr119309 13 37787220 to 37787225 5 + TSS region transcription start site region 119309
Tssr119310 13 37788071 to 37788075 4 + TSS region transcription start site region 119310
Gm46411 13 37793382 to 37799790 6408 - antisense lncRNA gene predicted gene, 46411
Tssr119311 13 37801534 to 37801538 4 + TSS region transcription start site region 119311
Tssr119312 13 37802059 to 37802092 33 + TSS region transcription start site region 119312
Tssr119313 13 37803206 to 37803240 34 + TSS region transcription start site region 119313
Tssr119314 13 37806156 to 37806166 10 + TSS region transcription start site region 119314
Tssr119315 13 37809473 to 37809522 49 + TSS region transcription start site region 119315
Cpgi5457 13 37825123 to 37828042 2919 CpG island CpG island 5457
Tssr119316 13 37825847 to 37825873 26 + TSS region transcription start site region 119316
Tssr119317 13 37825994 to 37826003 9 + TSS region transcription start site region 119317
Tssr119318 13 37826018 to 37826044 26 + TSS region transcription start site region 119318
Tssr119319 13 37826056 to 37826081 25 + TSS region transcription start site region 119319
Tssr119320 13 37826225 to 37826250 25 + TSS region transcription start site region 119320
Tssr119321 13 37826617 to 37826706 89 + TSS region transcription start site region 119321
Tssr119322 13 37826792 to 37826804 12 + TSS region transcription start site region 119322
Tssr119323 13 37826815 to 37826832 17 + TSS region transcription start site region 119323
Tssr119324 13 37826904 to 37826949 45 + TSS region transcription start site region 119324
Tssr122115 13 37827222 to 37827253 31 - TSS region transcription start site region 122115
Tssr119325 13 37833819 to 37833843 24 + TSS region transcription start site region 119325
Tssr119326 13 37837627 to 37837666 39 + TSS region transcription start site region 119326
Tssr119327 13 37841610 to 37841658 48 + TSS region transcription start site region 119327
Tssr119328 13 37845854 to 37845883 29 + TSS region transcription start site region 119328
Tssr119329 13 37846339 to 37846350 11 + TSS region transcription start site region 119329
Tssr119330 13 37848707 to 37848716 9 + TSS region transcription start site region 119330
Tssr119331 13 37853469 to 37853473 4 + TSS region transcription start site region 119331
Tssr119332 13 37856872 to 37856876 4 + TSS region transcription start site region 119332
Cpgi5458 13 37857349 to 37858290 941 CpG island CpG island 5458
Tssr119333 13 37857414 to 37857421 7 + TSS region transcription start site region 119333
Tssr119334 13 37857961 to 37857992 31 + TSS region transcription start site region 119334
Tssr119335 13 37864909 to 37864920 11 + TSS region transcription start site region 119335
Tssr119336 13 37873041 to 37873042 1 + TSS region transcription start site region 119336
Tssr119337 13 37873431 to 37873472 41 + TSS region transcription start site region 119337
Tssr4044 13 37895421 to 37895425 4 + TSS region transcription start site region 4044
Tssr119338 13 37896560 to 37896566 6 + TSS region transcription start site region 119338
D13Ertd150e 13 37922812 to 37923025 213 DNA segment DNA segment, Chr 13, ERATO Doi 150, expressed
Tssr119339 13 37930214 to 37930241 27 + TSS region transcription start site region 119339
Cpgi5459 13 37930756 to 37931277 521 CpG island CpG island 5459
Tssr119340 13 37936993 to 37937001 8 + TSS region transcription start site region 119340
Ssr1 13 37971401 to 37994236 22835 - protein coding gene signal sequence receptor, alpha
Tssr122116 13 37979511 to 37979529 18 - TSS region transcription start site region 122116
Tssr122117 13 37992099 to 37992116 17 - TSS region transcription start site region 122117
Cpgi5460 13 37993449 to 37994428 979 CpG island CpG island 5460
Tssr122118 13 37994052 to 37994060 8 - TSS region transcription start site region 122118
Tssr122119 13 37994075 to 37994091 16 - TSS region transcription start site region 122119
Tssr122120 13 37994111 to 37994184 73 - TSS region transcription start site region 122120
Cage1 13 38006052 to 38037019 30967 - protein coding gene cancer antigen 1
Tssr119341 13 38010802 to 38010842 40 + TSS region transcription start site region 119341