Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:37416964-37827603

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ly86 13 37345345 to 37419036 73691 + protein coding gene lymphocyte antigen 86
Tssr119289 13 37418535 to 37418548 13 + TSS region transcription start site region 119289
Tssr119290 13 37418662 to 37418685 23 + TSS region transcription start site region 119290
Tssr119291 13 37418763 to 37418793 30 + TSS region transcription start site region 119291
Tssr119292 13 37418842 to 37418860 18 + TSS region transcription start site region 119292
Gm4035 13 37421943 to 37435082 13139 - lincRNA gene predicted gene 4035
Gm47730 13 37439593 to 37440454 861 - lincRNA gene predicted gene, 47730
Tssr122110 13 37440068 to 37440089 21 - TSS region transcription start site region 122110
Gm29459 13 37449400 to 37451157 1757 - lincRNA gene predicted gene 29459
Gm29458 13 37452212 to 37453208 996 - lincRNA gene predicted gene 29458
AU017834 13 37472037 to 37479212 7175 unclassified gene expressed sequence AU017834
Gm47731 13 37472038 to 37479213 7175 + lincRNA gene predicted gene, 47731
Gm40914 13 37477085 to 37487980 10895 - lncRNA gene predicted gene, 40914
Tssr122111 13 37477842 to 37477871 29 - TSS region transcription start site region 122111
Tssr119293 13 37482381 to 37482392 11 + TSS region transcription start site region 119293
Gm47732 13 37482385 to 37483150 765 + lincRNA gene predicted gene, 47732
Tssr119294 13 37483405 to 37483427 22 + TSS region transcription start site region 119294
Gm30863 13 37490045 to 37532958 42913 - lncRNA gene predicted gene, 30863
Gm47734 13 37504206 to 37507752 3546 - lincRNA gene predicted gene, 47734
Gm29590 13 37509492 to 37512421 2929 + lincRNA gene predicted gene 29590
Lncbate6 13 37541357 to 37549725 8368 + lincRNA gene brown adipose tissue enriched long noncoding RNA 6
Tssr119295 13 37543057 to 37543073 16 + TSS region transcription start site region 119295
Tssr119296 13 37543076 to 37543103 27 + TSS region transcription start site region 119296
Gm47751 13 37561945 to 37564972 3027 - lincRNA gene predicted gene, 47751
D13Mit117 13 37562963 to 37563080 117 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 117
Heal17 13 37562963 to 37563080 117 QTL wound healing/regeneration 17
Tssr119297 13 37578393 to 37578394 1 + TSS region transcription start site region 119297
Tssr119298 13 37581058 to 37581110 52 + TSS region transcription start site region 119298
Gm47754 13 37581077 to 37589313 8236 + lincRNA gene predicted gene, 47754
Tssr119299 13 37581116 to 37581144 28 + TSS region transcription start site region 119299
Tssr119300 13 37581208 to 37581218 10 + TSS region transcription start site region 119300
Gm47753 13 37582271 to 37582564 293 + pseudogene predicted gene, 47753
Tssr119301 13 37598719 to 37598728 9 + TSS region transcription start site region 119301
Tssr119302 13 37598760 to 37598773 13 + TSS region transcription start site region 119302
Gm40915 13 37616964 to 37627603 10639 - lincRNA gene predicted gene, 40915
Gm40916 13 37633785 to 37643342 9557 - lincRNA gene predicted gene, 40916
Gm40917 13 37643905 to 37648099 4194 - lncRNA gene predicted gene, 40917
AI463229 13 37657022 to 37667734 10712 - lincRNA gene expressed sequence AI463229
Cpgi5455 13 37657338 to 37657614 276 CpG island CpG island 5455
D13Mit38 13 37666021 to 37666163 142 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 38
Gm49350 13 37684925 to 37686425 1500 - lincRNA gene predicted gene, 49350
Gm40918 13 37692089 to 37717648 25559 - lincRNA gene predicted gene, 40918
Gm49351 13 37697306 to 37698158 852 - pseudogene predicted gene, 49351
Tssr119303 13 37700999 to 37701000 1 + TSS region transcription start site region 119303
Gm45936 13 37717382 to 37734742 17360 - lncRNA gene predicted gene, 45936
Tssr122112 13 37729823 to 37729830 7 - TSS region transcription start site region 122112
Tssr122113 13 37743869 to 37743870 1 - TSS region transcription start site region 122113
Gm31600 13 37761545 to 37767935 6390 + lincRNA gene predicted gene, 31600
Tssr122114 13 37769931 to 37769935 4 - TSS region transcription start site region 122114
Cpgi5456 13 37777906 to 37779132 1226 CpG island CpG island 5456
Tssr119304 13 37778384 to 37778403 19 + TSS region transcription start site region 119304
Rreb1 13 37778400 to 37952005 173605 + protein coding gene ras responsive element binding protein 1
Tssr119305 13 37778412 to 37778424 12 + TSS region transcription start site region 119305
Tssr119306 13 37778438 to 37778468 30 + TSS region transcription start site region 119306
Tssr119307 13 37778473 to 37778500 27 + TSS region transcription start site region 119307
Tssr119308 13 37778522 to 37778531 9 + TSS region transcription start site region 119308
Tssr119309 13 37787220 to 37787225 5 + TSS region transcription start site region 119309
Tssr119310 13 37788071 to 37788075 4 + TSS region transcription start site region 119310
Gm46411 13 37793382 to 37799790 6408 - antisense lncRNA gene predicted gene, 46411
Tssr119311 13 37801534 to 37801538 4 + TSS region transcription start site region 119311
Tssr119312 13 37802059 to 37802092 33 + TSS region transcription start site region 119312
Tssr119313 13 37803206 to 37803240 34 + TSS region transcription start site region 119313
Tssr119314 13 37806156 to 37806166 10 + TSS region transcription start site region 119314
Tssr119315 13 37809473 to 37809522 49 + TSS region transcription start site region 119315
Cpgi5457 13 37825123 to 37828042 2919 CpG island CpG island 5457
Tssr119316 13 37825847 to 37825873 26 + TSS region transcription start site region 119316
Tssr119317 13 37825994 to 37826003 9 + TSS region transcription start site region 119317
Tssr119318 13 37826018 to 37826044 26 + TSS region transcription start site region 119318
Tssr119319 13 37826056 to 37826081 25 + TSS region transcription start site region 119319
Tssr119320 13 37826225 to 37826250 25 + TSS region transcription start site region 119320
Tssr119321 13 37826617 to 37826706 89 + TSS region transcription start site region 119321
Tssr119322 13 37826792 to 37826804 12 + TSS region transcription start site region 119322
Tssr119323 13 37826815 to 37826832 17 + TSS region transcription start site region 119323
Tssr119324 13 37826904 to 37826949 45 + TSS region transcription start site region 119324
Tssr122115 13 37827222 to 37827253 31 - TSS region transcription start site region 122115