Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:3639825-3901203

Filter by:
21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Asb13 13 3634013 to 3651779 17766 + protein coding gene ankyrin repeat and SOCS box-containing 13
Gm23084 13 3648537 to 3648650 113 + rRNA gene predicted gene, 23084
Tssr118207 13 3652777 to 3652783 6 + TSS region transcription start site region 118207
Cpgi5248 13 3653435 to 3653614 179 CpG island CpG island 5248
Gm47695 13 3759825 to 3781203 21378 + lincRNA gene predicted gene, 47695
Gm35190 13 3762282 to 3766722 4440 - lincRNA gene predicted gene, 35190
Tssr121287 13 3767166 to 3767181 15 - TSS region transcription start site region 121287
Calml3 13 3802896 to 3804316 1420 - protein coding gene calmodulin-like 3
Tssr121288 13 3803285 to 3803291 6 - TSS region transcription start site region 121288
Cpgi5249 13 3803789 to 3804030 241 CpG island CpG island 5249
Tssr121289 13 3804214 to 3804239 25 - TSS region transcription start site region 121289
Tssr121290 13 3804307 to 3804337 30 - TSS region transcription start site region 121290
Gm40655 13 3825519 to 3836003 10484 + sense overlapping lncRNA gene predicted gene, 40655
Calm4 13 3837757 to 3838671 914 + protein coding gene calmodulin 4
Calm5 13 3854173 to 3854761 588 + protein coding gene calmodulin 5
Net1 13 3882018 to 3918220 36202 - protein coding gene neuroepithelial cell transforming gene 1
Cpgi5250 13 3893329 to 3893703 374 CpG island CpG island 5250
Tssr121291 13 3893506 to 3893553 47 - TSS region transcription start site region 121291
Tssr121292 13 3893556 to 3893589 33 - TSS region transcription start site region 121292
Tssr121293 13 3894295 to 3894300 5 - TSS region transcription start site region 121293
Gm47813 13 3899209 to 3900248 1039 - unclassified gene predicted gene, 47813