Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:36186534-37267646

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm48765 13 36006725 to 36189723 182998 - antisense lncRNA gene predicted gene, 48765
Fars2 13 36117620 to 36537595 419975 + protein coding gene phenylalanine-tRNA synthetase 2 (mitochondrial)
Gm40912 13 36207753 to 36228022 20269 + lncRNA gene predicted gene, 40912
Gm48766 13 36252359 to 36256920 4561 + unclassified gene predicted gene, 48766
Tssr119261 13 36255479 to 36255484 5 + TSS region transcription start site region 119261
Tssr119262 13 36263150 to 36263153 3 + TSS region transcription start site region 119262
Tssr119263 13 36359793 to 36359797 4 + TSS region transcription start site region 119263
V25Dq7 13 36400000 to 36400000 0 QTL vitamin D inactive form serum level QTL 7
Tssr119264 13 36423378 to 36423385 7 + TSS region transcription start site region 119264
Gm48763 13 36458447 to 36459280 833 - unclassified gene predicted gene, 48763
Tssr119265 13 36475088 to 36475145 57 + TSS region transcription start site region 119265
Tssr119266 13 36486140 to 36486146 6 + TSS region transcription start site region 119266
Gm8277 13 36558466 to 36559065 599 - pseudogene predicted gene 8277
Gm48767 13 36569764 to 36575934 6170 - antisense lncRNA gene predicted gene, 48767
Tssr122091 13 36577978 to 36578000 22 - TSS region transcription start site region 122091
Cpgi5446 13 36578576 to 36579099 523 CpG island CpG island 5446
4933436N17Rik 13 36582091 to 36583526 1435 - unclassified gene RIKEN cDNA 4933436N17 gene
Gm46409 13 36612734 to 36633313 20579 + sense intronic lncRNA gene predicted gene, 46409
Cpgi5447 13 36612992 to 36613237 245 CpG island CpG island 5447
Tssr122092 13 36620931 to 36620936 5 - TSS region transcription start site region 122092
Gm46410 13 36645120 to 36653209 8089 + lncRNA gene predicted gene, 46410
Gm26395 13 36654405 to 36654536 131 + snoRNA gene predicted gene, 26395
D13Dcr3 13 36676310 to 36676405 95 DNA segment DNA Segment, Chr 13, Derry C. Roopenian 3
Gm38636 13 36717255 to 36725176 7921 + lncRNA gene predicted gene, 38636
Cpgi5448 13 36724510 to 36724911 401 CpG island CpG island 5448
Nrn1 13 36725622 to 36734477 8855 - protein coding gene neuritin 1
Tssr122093 13 36726426 to 36726445 19 - TSS region transcription start site region 122093
Tssr122094 13 36726478 to 36726491 13 - TSS region transcription start site region 122094
Tssr122095 13 36726524 to 36726535 11 - TSS region transcription start site region 122095
Cpgi5449 13 36726534 to 36727646 1112 CpG island CpG island 5449
Tssr122096 13 36726596 to 36726620 24 - TSS region transcription start site region 122096
Gm30177 13 36727304 to 36729167 1863 + antisense lncRNA gene predicted gene, 30177
Tssr119267 13 36727324 to 36727348 24 + TSS region transcription start site region 119267
Tssr119268 13 36730042 to 36730055 13 + TSS region transcription start site region 119268
Tssr119269 13 36730068 to 36730078 10 + TSS region transcription start site region 119269
Tssr119270 13 36730096 to 36730111 15 + TSS region transcription start site region 119270
Cpgi5450 13 36731921 to 36732343 422 CpG island CpG island 5450
Tssr122097 13 36734266 to 36734275 9 - TSS region transcription start site region 122097
Tssr122098 13 36734293 to 36734308 15 - TSS region transcription start site region 122098
Tssr122099 13 36734371 to 36734385 14 - TSS region transcription start site region 122099
Tssr122100 13 36734404 to 36734415 11 - TSS region transcription start site region 122100
Tssr122101 13 36734426 to 36734447 21 - TSS region transcription start site region 122101
Tssr122102 13 36734450 to 36734492 42 - TSS region transcription start site region 122102
Cpgi5451 13 36734811 to 36735455 644 CpG island CpG island 5451
Tssr119271 13 36734856 to 36734867 11 + TSS region transcription start site region 119271
Cpgi5452 13 36735915 to 36736805 890 CpG island CpG island 5452
Gm49144 13 36836366 to 36885596 49230 + antisense lncRNA gene predicted gene, 49144
Tssr119272 13 36857567 to 36857577 10 + TSS region transcription start site region 119272
Gm47675 13 36864016 to 36864625 609 - lincRNA gene predicted gene, 47675
F13a1 13 36867178 to 37050244 183066 - protein coding gene coagulation factor XIII, A1 subunit
Tssr4043 13 36885431 to 36885432 1 + TSS region transcription start site region 4043
D13Mit266 13 36941505 to 36941635 130 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 266
Gm30489 13 36963239 to 36973329 10090 + antisense lncRNA gene predicted gene, 30489
Tssr122103 13 36971599 to 36971602 3 - TSS region transcription start site region 122103
Cpgi5453 13 36988911 to 36989081 170 CpG island CpG island 5453
Gm30240 13 36989093 to 36997851 8758 + lncRNA gene predicted gene, 30240
Tssr122104 13 37049182 to 37049191 9 - TSS region transcription start site region 122104
Tssr122105 13 37049203 to 37049220 17 - TSS region transcription start site region 122105
Tssr122106 13 37050237 to 37050274 37 - TSS region transcription start site region 122106
Tssr122107 13 37050290 to 37050301 11 - TSS region transcription start site region 122107
Gm30549 13 37070967 to 37072531 1564 + lncRNA gene predicted gene, 30549
Gm18643 13 37092547 to 37095553 3006 - pseudogene predicted gene, 18643
Tssr122108 13 37103969 to 37104001 32 - TSS region transcription start site region 122108
Gm47707 13 37156018 to 37157755 1737 + lincRNA gene predicted gene, 47707
Gm30600 13 37237649 to 37244907 7258 - lincRNA gene predicted gene, 30600
Gm47709 13 37248660 to 37252165 3505 + lincRNA gene predicted gene, 47709
Tssr122109 13 37255399 to 37255404 5 - TSS region transcription start site region 122109