Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:35800457-36026389

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdyl 13 35659833 to 35874063 214230 + protein coding gene chromodomain protein, Y chromosome-like
Gm48706 13 35798750 to 35802136 3386 + unclassified gene predicted gene, 48706
Tssr119246 13 35833556 to 35833559 3 + TSS region transcription start site region 119246
Tssr119247 13 35834837 to 35834841 4 + TSS region transcription start site region 119247
Tssr119248 13 35853556 to 35853568 12 + TSS region transcription start site region 119248
Tssr119249 13 35870744 to 35870750 6 + TSS region transcription start site region 119249
D13Mit60 13 35876925 to 35877067 142 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 60
Gssq1 13 35876925 to 35877067 142 QTL glomerulosclerosis severity QTL 1
Scgq5 13 35876925 to 96102654 60225729 QTL spontaneous crescentic glomerulonephritis QTL 5
Rpp40 13 35893472 to 35906359 12887 - protein coding gene ribonuclease P 40 subunit
Gm48746 13 35905457 to 35921389 15932 + lincRNA gene predicted gene, 48746
Cpgi5443 13 35905869 to 35906391 522 CpG island CpG island 5443
Tssr122086 13 35906324 to 35906364 40 - TSS region transcription start site region 122086
Gm48756 13 35937549 to 35937833 284 - pseudogene predicted gene, 48756
Ppp1r3g 13 35958839 to 35970388 11549 + protein coding gene protein phosphatase 1, regulatory subunit 3G
Tssr119250 13 35958850 to 35958862 12 + TSS region transcription start site region 119250
Tssr119251 13 35958872 to 35958886 14 + TSS region transcription start site region 119251
Gm30127 13 35959003 to 35961155 2152 - antisense lncRNA gene predicted gene, 30127
Tssr4042 13 35961388 to 35961393 5 + TSS region transcription start site region 4042
Tssr119252 13 35963127 to 35963131 4 + TSS region transcription start site region 119252
Tssr119253 13 35963570 to 35963575 5 + TSS region transcription start site region 119253
Tssr119254 13 35967860 to 35967888 28 + TSS region transcription start site region 119254
Cpgi5444 13 35968037 to 35969812 1775 CpG island CpG island 5444
Tssr119255 13 35968467 to 35968471 4 + TSS region transcription start site region 119255
Lyrm4 13 35978797 to 36117357 138560 - protein coding gene LYR motif containing 4
Tmed10-ps 13 35990861 to 35991520 659 - pseudogene transmembrane p24 trafficking protein 10, pseudogene
Gm18132 13 35992132 to 35993428 1296 + pseudogene predicted gene, 18132
Gm48770 13 35995453 to 36014464 19011 + antisense lncRNA gene predicted gene, 48770
Gm48765 13 36006725 to 36189723 182998 - antisense lncRNA gene predicted gene, 48765