Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:35709837-35959841

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdyl 13 35659833 to 35874063 214230 + protein coding gene chromodomain protein, Y chromosome-like
D13Mit274 13 35736190 to 35736309 119 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 274
Tssr119241 13 35738437 to 35738462 25 + TSS region transcription start site region 119241
Tssr119242 13 35738487 to 35738530 43 + TSS region transcription start site region 119242
Cpgi5442 13 35740435 to 35742473 2038 CpG island CpG island 5442
Tssr119243 13 35741374 to 35741385 11 + TSS region transcription start site region 119243
Tssr119244 13 35741408 to 35741516 108 + TSS region transcription start site region 119244
Gm48708 13 35773573 to 35776896 3323 - antisense lncRNA gene predicted gene, 48708
Tssr119245 13 35785196 to 35785200 4 + TSS region transcription start site region 119245
Gm48706 13 35798750 to 35802136 3386 + unclassified gene predicted gene, 48706
Tssr119246 13 35833556 to 35833559 3 + TSS region transcription start site region 119246
Tssr119247 13 35834837 to 35834841 4 + TSS region transcription start site region 119247
Tssr119248 13 35853556 to 35853568 12 + TSS region transcription start site region 119248
Tssr119249 13 35870744 to 35870750 6 + TSS region transcription start site region 119249
Gssq1 13 35876925 to 35877067 142 QTL glomerulosclerosis severity QTL 1
Scgq5 13 35876925 to 96102654 60225729 QTL spontaneous crescentic glomerulonephritis QTL 5
D13Mit60 13 35876925 to 35877067 142 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 60
Rpp40 13 35893472 to 35906359 12887 - protein coding gene ribonuclease P 40 subunit
Gm48746 13 35905457 to 35921389 15932 + lincRNA gene predicted gene, 48746
Cpgi5443 13 35905869 to 35906391 522 CpG island CpG island 5443
Tssr122086 13 35906324 to 35906364 40 - TSS region transcription start site region 122086
Gm48756 13 35937549 to 35937833 284 - pseudogene predicted gene, 48756
Ppp1r3g 13 35958839 to 35970388 11549 + protein coding gene protein phosphatase 1, regulatory subunit 3G
Tssr119250 13 35958850 to 35958862 12 + TSS region transcription start site region 119250
Tssr119251 13 35958872 to 35958886 14 + TSS region transcription start site region 119251
Gm30127 13 35959003 to 35961155 2152 - antisense lncRNA gene predicted gene, 30127