Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:34980660-35442048

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm16984 13 34963949 to 34983318 19369 + antisense lncRNA gene predicted gene, 16984
Eci2 13 34977748 to 35027090 49342 - protein coding gene enoyl-Coenzyme A delta isomerase 2
Tssr122075 13 34990838 to 34990879 41 - TSS region transcription start site region 122075
Tssr122076 13 34993196 to 34993219 23 - TSS region transcription start site region 122076
Tssr122077 13 34993228 to 34993246 18 - TSS region transcription start site region 122077
Cpgi5439 13 34993721 to 34994318 597 CpG island CpG island 5439
Tssr122078 13 34993873 to 34993914 41 - TSS region transcription start site region 122078
Tssr122079 13 34994062 to 34994086 24 - TSS region transcription start site region 122079
Tssr122080 13 34994103 to 34994148 45 - TSS region transcription start site region 122080
D13Mit242 13 34998422 to 34998546 124 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 242
Gm46408 13 35007680 to 35011090 3410 - pseudogene predicted gene, 46408
Tssr122081 13 35027033 to 35027055 22 - TSS region transcription start site region 122081
Tssr122082 13 35027077 to 35027099 22 - TSS region transcription start site region 122082
Gm48626 13 35027354 to 35031946 4592 - lincRNA gene predicted gene, 48626
Gm48629 13 35065461 to 35067620 2159 + lincRNA gene predicted gene, 48629
Gm40910 13 35078564 to 35083396 4832 + lincRNA gene predicted gene, 40910
4930529N20Rik 13 35167147 to 35167824 677 - lincRNA gene RIKEN cDNA 4930529N20 gene
Tssr122083 13 35167803 to 35167806 3 - TSS region transcription start site region 122083
1700011B04Rik 13 35181623 to 35188014 6391 + lncRNA gene RIKEN cDNA 1700011B04 gene
Cpgi5440 13 35189033 to 35189361 328 CpG island CpG island 5440
Tssr119238 13 35189260 to 35189267 7 + TSS region transcription start site region 119238
1700019C18Rik 13 35210660 to 35212048 1388 - lincRNA gene RIKEN cDNA 1700019C18 gene
Tssr122084 13 35211996 to 35212029 33 - TSS region transcription start site region 122084
Tssr122085 13 35212044 to 35212052 8 - TSS region transcription start site region 122085
Gm48694 13 35242971 to 35256521 13550 - lincRNA gene predicted gene, 48694
Gm22674 13 35293147 to 35293277 130 - snoRNA gene predicted gene, 22674
Gm48703 13 35395383 to 35455832 60449 + lincRNA gene predicted gene, 48703