MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:34884400-34964404

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prpf4b	13	34875302 to 34906064	30762	+	protein coding gene	pre-mRNA processing factor 4B
Tssr119233	13	34888151 to 34888164	13	+	TSS region	transcription start site region 119233
Fam217a	13	34909960 to 34924310	14350	-	protein coding gene	family with sequence similarity 217, member A
Cpgi5437	13	34916604 to 34917111	507		CpG island	CpG island 5437
Tssr122071	13	34916977 to 34917038	61	-	TSS region	transcription start site region 122071
Tssr122072	13	34924343 to 34924367	24	-	TSS region	transcription start site region 122072
Tssr119234	13	34924400 to 34924404	4	+	TSS region	transcription start site region 119234
4933417A18Rik	13	34924409 to 34955875	31466	+	protein coding gene	RIKEN cDNA 4933417A18 gene
Tssr119235	13	34924413 to 34924426	13	+	TSS region	transcription start site region 119235
Tssr119236	13	34924428 to 34924436	8	+	TSS region	transcription start site region 119236
Tssr119237	13	34924438 to 34924455	17	+	TSS region	transcription start site region 119237
Gm8245	13	34940643 to 34941629	986	+	pseudogene	predicted gene 8245
Eci3	13	34946614 to 34963810	17196	-	protein coding gene	enoyl-Coenzyme A delta isomerase 3
Gm47217	13	34962902 to 34963060	158	-	pseudogene	predicted gene, 47217
Cpgi5438	13	34963572 to 34963878	306		CpG island	CpG island 5438
Tssr122073	13	34963791 to 34963816	25	-	TSS region	transcription start site region 122073
Tssr122074	13	34963825 to 34963836	11	-	TSS region	transcription start site region 122074
Gm16984	13	34963949 to 34983318	19369	+	antisense lncRNA gene	predicted gene, 16984