Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:3473901-3653909

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5244 13 3478077 to 3478689 612 CpG island CpG island 5244
Tssr118194 13 3478226 to 3478269 43 + TSS region transcription start site region 118194
2810429I04Rik 13 3498050 to 3501393 3343 + lincRNA gene RIKEN cDNA 2810429I04 gene
Gm40654 13 3514471 to 3519532 5061 - lncRNA gene predicted gene, 40654
Cpgi5245 13 3537521 to 3538904 1383 CpG island CpG island 5245
Tssr121275 13 3537664 to 3537667 3 - TSS region transcription start site region 121275
Gdi2 13 3538075 to 3566261 28186 + protein coding gene guanosine diphosphate (GDP) dissociation inhibitor 2
Tssr118195 13 3538111 to 3538150 39 + TSS region transcription start site region 118195
Tssr118196 13 3538439 to 3538461 22 + TSS region transcription start site region 118196
Tssr118197 13 3538478 to 3538484 6 + TSS region transcription start site region 118197
Tssr118198 13 3538614 to 3538635 21 + TSS region transcription start site region 118198
Tssr118199 13 3541810 to 3541814 4 + TSS region transcription start site region 118199
Tssr118200 13 3548886 to 3548926 40 + TSS region transcription start site region 118200
Tssr118201 13 3556971 to 3557018 47 + TSS region transcription start site region 118201
Gm48838 13 3562385 to 3563618 1233 + unclassified gene predicted gene, 48838
Tssr118202 13 3563901 to 3563909 8 + TSS region transcription start site region 118202
Tssr118203 13 3564987 to 3565019 32 + TSS region transcription start site region 118203
Tasor2 13 3566035 to 3611108 45073 - protein coding gene transcription activation suppressor family member 2
Tssr121276 13 3601458 to 3601471 13 - TSS region transcription start site region 121276
Tssr121277 13 3601482 to 3601494 12 - TSS region transcription start site region 121277
Cpgi5246 13 3610128 to 3611345 1217 CpG island CpG island 5246
Tssr121278 13 3610265 to 3610270 5 - TSS region transcription start site region 121278
Tssr121279 13 3610281 to 3610300 19 - TSS region transcription start site region 121279
Tssr121280 13 3610982 to 3610998 16 - TSS region transcription start site region 121280
Tssr121281 13 3611002 to 3611013 11 - TSS region transcription start site region 121281
Tssr121282 13 3611017 to 3611034 17 - TSS region transcription start site region 121282
Tssr121283 13 3611036 to 3611062 26 - TSS region transcription start site region 121283
Tssr121284 13 3611064 to 3611118 54 - TSS region transcription start site region 121284
Tssr121285 13 3611134 to 3611147 13 - TSS region transcription start site region 121285
Tssr121286 13 3611189 to 3611210 21 - TSS region transcription start site region 121286
Tssr118204 13 3611324 to 3611350 26 + TSS region transcription start site region 118204
Gm20277 13 3612848 to 3613774 926 + pseudogene predicted gene, 20277
Cpgi5247 13 3633786 to 3634509 723 CpG island CpG island 5247
Tssr118205 13 3634012 to 3634027 15 + TSS region transcription start site region 118205
Asb13 13 3634013 to 3651779 17766 + protein coding gene ankyrin repeat and SOCS box-containing 13
Tssr118206 13 3634034 to 3634108 74 + TSS region transcription start site region 118206
Gm23084 13 3648537 to 3648650 113 + rRNA gene predicted gene, 23084
Tssr118207 13 3652777 to 3652783 6 + TSS region transcription start site region 118207
Cpgi5248 13 3653435 to 3653614 179 CpG island CpG island 5248