Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:34646528-34847582

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pxdc1 13 34627840 to 34653133 25293 - protein coding gene PX domain containing 1
Tssr122061 13 34649471 to 34649474 3 - TSS region transcription start site region 122061
Cpgi5433 13 34651470 to 34653341 1871 CpG island CpG island 5433
Tssr122062 13 34652642 to 34652649 7 - TSS region transcription start site region 122062
Tssr122063 13 34652673 to 34652688 15 - TSS region transcription start site region 122063
Tssr122064 13 34652883 to 34652896 13 - TSS region transcription start site region 122064
Tssr122065 13 34652898 to 34652925 27 - TSS region transcription start site region 122065
Tssr119223 13 34652910 to 34652941 31 + TSS region transcription start site region 119223
Gm15908 13 34652923 to 34666774 13851 + antisense lncRNA gene predicted gene 15908
Tssr122066 13 34652933 to 34652976 43 - TSS region transcription start site region 122066
Tssr122067 13 34653083 to 34653114 31 - TSS region transcription start site region 122067
Gm47149 13 34680733 to 34680921 188 - pseudogene predicted gene, 47149
Gm47150 13 34711449 to 34715030 3581 + lincRNA gene predicted gene, 47150
Tssr122068 13 34715488 to 34715492 4 - TSS region transcription start site region 122068
Gm47151 13 34718056 to 34720751 2695 - lincRNA gene predicted gene, 47151
Gm47152 13 34720682 to 34728661 7979 + lincRNA gene predicted gene, 47152
Tssr119224 13 34734837 to 34734862 25 + TSS region transcription start site region 119224
Fam50b 13 34734850 to 34747623 12773 + protein coding gene family with sequence similarity 50, member B
Tssr119225 13 34734871 to 34734882 11 + TSS region transcription start site region 119225
Tssr119226 13 34739607 to 34739636 29 + TSS region transcription start site region 119226
Cpgi5434 13 34746528 to 34747582 1054 CpG island CpG island 5434
Gm47157 13 34781585 to 34814544 32959 - lincRNA gene predicted gene, 47157