Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:34427840-34853133

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit241 13 34439478 to 34439590 112 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 241
Gm40908 13 34459557 to 34482181 22624 - lncRNA gene predicted gene, 40908
Gm40909 13 34500728 to 34506511 5783 - lincRNA gene predicted gene, 40909
Gm36758 13 34561986 to 34562295 309 + pseudogene predicted gene, 36758
Gm47127 13 34610827 to 34612246 1419 - lincRNA gene predicted gene, 47127
Tssr4041 13 34627755 to 34627759 4 + TSS region transcription start site region 4041
Pxdc1 13 34627840 to 34653133 25293 - protein coding gene PX domain containing 1
Tssr122060 13 34628318 to 34628325 7 - TSS region transcription start site region 122060
Tssr122061 13 34649471 to 34649474 3 - TSS region transcription start site region 122061
Cpgi5433 13 34651470 to 34653341 1871 CpG island CpG island 5433
Tssr122062 13 34652642 to 34652649 7 - TSS region transcription start site region 122062
Tssr122063 13 34652673 to 34652688 15 - TSS region transcription start site region 122063
Tssr122064 13 34652883 to 34652896 13 - TSS region transcription start site region 122064
Tssr122065 13 34652898 to 34652925 27 - TSS region transcription start site region 122065
Tssr119223 13 34652910 to 34652941 31 + TSS region transcription start site region 119223
Gm15908 13 34652923 to 34666774 13851 + antisense lncRNA gene predicted gene 15908
Tssr122066 13 34652933 to 34652976 43 - TSS region transcription start site region 122066
Tssr122067 13 34653083 to 34653114 31 - TSS region transcription start site region 122067
Gm47149 13 34680733 to 34680921 188 - pseudogene predicted gene, 47149
Gm47150 13 34711449 to 34715030 3581 + lincRNA gene predicted gene, 47150
Tssr122068 13 34715488 to 34715492 4 - TSS region transcription start site region 122068
Gm47151 13 34718056 to 34720751 2695 - lincRNA gene predicted gene, 47151
Gm47152 13 34720682 to 34728661 7979 + lincRNA gene predicted gene, 47152
Tssr119224 13 34734837 to 34734862 25 + TSS region transcription start site region 119224
Fam50b 13 34734850 to 34747623 12773 + protein coding gene family with sequence similarity 50, member B
Tssr119225 13 34734871 to 34734882 11 + TSS region transcription start site region 119225
Tssr119226 13 34739607 to 34739636 29 + TSS region transcription start site region 119226
Cpgi5434 13 34746528 to 34747582 1054 CpG island CpG island 5434
Gm47157 13 34781585 to 34814544 32959 - lincRNA gene predicted gene, 47157