MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:34102726-34223517

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4930447K03Rik	13	34084155 to 34113272	29117	-	lncRNA gene	RIKEN cDNA 4930447K03 gene
Tssr122051	13	34113258 to 34113267	9	-	TSS region	transcription start site region 122051
Gm47076	13	34119701 to 34122465	2764	+	lincRNA gene	predicted gene, 47076
Tubb2b	13	34127008 to 34130354	3346	-	protein coding gene	tubulin, beta 2B class IIB
Tssr122052	13	34128422 to 34128455	33	-	TSS region	transcription start site region 122052
Cpgi5429	13	34129783 to 34130778	995		CpG island	CpG island 5429
Tssr122053	13	34130345 to 34130361	16	-	TSS region	transcription start site region 122053
Tssr119220	13	34130584 to 34130606	22	+	TSS region	transcription start site region 119220
Cpgi5430	13	34131459 to 34131752	293		CpG island	CpG island 5430
Gm36500	13	34133860 to 34137654	3794	+	lincRNA gene	predicted gene, 36500
Gm36549	13	34148432 to 34151024	2592	-	lncRNA gene	predicted gene, 36549
Cpgi5431	13	34162726 to 34163517	791		CpG island	CpG island 5431
Tssr119221	13	34162953 to 34163033	80	+	TSS region	transcription start site region 119221
Psmg4	13	34162964 to 34178172	15208	+	protein coding gene	proteasome (prosome, macropain) assembly chaperone 4
Tssr119222	13	34163039 to 34163055	16	+	TSS region	transcription start site region 119222
Slc22a23	13	34179158 to 34345182	166024	-	protein coding gene	solute carrier family 22, member 23
Tssr122054	13	34182665 to 34182683	18	-	TSS region	transcription start site region 122054
2900079J23Rik	13	34196632 to 34196883	251		unclassified gene	RIKEN cDNA 2900079J23 gene