Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:33014790-33966002

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101 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Serpinb9 13 33003250 to 33017957 14707 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9
Tssr119173 13 33015924 to 33015937 13 + TSS region transcription start site region 119173
Tssr119174 13 33016145 to 33016163 18 + TSS region transcription start site region 119174
Tssr119175 13 33016184 to 33016232 48 + TSS region transcription start site region 119175
Tssr119176 13 33017125 to 33017135 10 + TSS region transcription start site region 119176
Tssr119177 13 33027408 to 33027419 11 + TSS region transcription start site region 119177
Serpinb9b 13 33027414 to 33040559 13145 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9b
Tssr119178 13 33027502 to 33027513 11 + TSS region transcription start site region 119178
Tssr119179 13 33027532 to 33027547 15 + TSS region transcription start site region 119179
Gm36099 13 33031202 to 33034560 3358 - antisense lncRNA gene predicted gene, 36099
Tssr122020 13 33034632 to 33034648 16 - TSS region transcription start site region 122020
Tssr122021 13 33034651 to 33034663 12 - TSS region transcription start site region 122021
Tssr119180 13 33039828 to 33039842 14 + TSS region transcription start site region 119180
Tssr119181 13 33039898 to 33039917 19 + TSS region transcription start site region 119181
Tssr119182 13 33039945 to 33039954 9 + TSS region transcription start site region 119182
Tssr119183 13 33039971 to 33040005 34 + TSS region transcription start site region 119183
Tssr122022 13 33040032 to 33040043 11 - TSS region transcription start site region 122022
Tssr119184 13 33040056 to 33040074 18 + TSS region transcription start site region 119184
Tssr119185 13 33040260 to 33040297 37 + TSS region transcription start site region 119185
Tssr119186 13 33040361 to 33040371 10 + TSS region transcription start site region 119186
Tssr119187 13 33041003 to 33041009 6 + TSS region transcription start site region 119187
Gm18316 13 33065295 to 33066815 1520 + pseudogene predicted gene, 18316
Tssr4035 13 33078510 to 33078523 13 + TSS region transcription start site region 4035
Serpinb1b 13 33078575 to 33094380 15805 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1b
Tssr119188 13 33084049 to 33084058 9 + TSS region transcription start site region 119188
Tssr119189 13 33084061 to 33084072 11 + TSS region transcription start site region 119189
Tssr119190 13 33084095 to 33084104 9 + TSS region transcription start site region 119190
Tssr119191 13 33084113 to 33084146 33 + TSS region transcription start site region 119191
Gm11384 13 33105539 to 33133493 27954 - pseudogene predicted gene 11384
Gm11383 13 33120519 to 33121322 803 - pseudogene predicted gene 11383
Gm18708 13 33137574 to 33138240 666 - pseudogene predicted gene, 18708
Tssr4036 13 33139455 to 33139456 1 - TSS region transcription start site region 4036
Serpinb9c 13 33149275 to 33159742 10467 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9c
Tssr122023 13 33158362 to 33158374 12 - TSS region transcription start site region 122023
Tssr122024 13 33158394 to 33158417 23 - TSS region transcription start site region 122024
Tssr122025 13 33159737 to 33159755 18 - TSS region transcription start site region 122025
Tssr119192 13 33192952 to 33192964 12 + TSS region transcription start site region 119192
Serpinb9d 13 33192959 to 33203129 10170 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9d
Gm11385 13 33217268 to 33218151 883 - pseudogene predicted gene 11385
Gm47788 13 33237702 to 33238305 603 + pseudogene predicted gene, 47788
Serpinb9e 13 33249610 to 33260846 11236 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9e
Gm40905 13 33284223 to 33293474 9251 + lncRNA gene predicted gene, 40905
Serpinb9f 13 33324077 to 33335370 11293 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9f
Gm40906 13 33358862 to 33368110 9248 + lncRNA gene predicted gene, 40906
Gm11397 13 33395673 to 33405145 9472 + protein coding gene predicted gene 11397
Gm19155 13 33409104 to 33436782 27678 + pseudogene predicted gene, 19155
Tssr119193 13 33484784 to 33484787 3 + TSS region transcription start site region 119193
Serpinb9g 13 33484790 to 33496002 11212 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9g
Gm11387 13 33508172 to 33526311 18139 + pseudogene predicted gene 11387
Gm11386 13 33531613 to 33531935 322 - pseudogene predicted gene 11386
Gm11393 13 33542999 to 33550698 7699 + pseudogene predicted gene 11393
Tssr122026 13 33559681 to 33559690 9 - TSS region transcription start site region 122026
Gm6093 13 33562486 to 33569317 6831 - lincRNA gene predicted gene 6093
Tssr122027 13 33566242 to 33566252 10 - TSS region transcription start site region 122027
Gm25043 13 33567794 to 33568005 211 + ribozyme gene predicted gene, 25043
Gm47916 13 33569021 to 33572086 3065 + lincRNA gene predicted gene, 47916
Tssr122028 13 33569310 to 33569324 14 - TSS region transcription start site region 122028
Tssr122029 13 33569480 to 33569496 16 - TSS region transcription start site region 122029
Tssr4037 13 33569530 to 33569540 10 - TSS region transcription start site region 4037
Gm5194 13 33596035 to 33596776 741 - pseudogene predicted gene 5194
Gm11388 13 33641625 to 33641783 158 + pseudogene predicted gene 11388
Tssr119194 13 33661402 to 33661406 4 + TSS region transcription start site region 119194
Serpinb6d 13 33661405 to 33671581 10176 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6d
Gm11389 13 33686457 to 33689508 3051 + pseudogene predicted gene 11389
Gm26701 13 33700473 to 33701102 629 - pseudogene predicted gene, 26701
Gm11392 13 33718276 to 33722055 3779 + pseudogene predicted gene 11392
Gm11394 13 33729051 to 33729861 810 - pseudogene predicted gene 11394
Gm11395 13 33741240 to 33742038 798 + pseudogene predicted gene 11395
Vmn2r-ps94 13 33766992 to 33811610 44618 + pseudogene vomeronasal 2, receptor, pseudogene 94
Serpinb6e 13 33832345 to 33843408 11063 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6e
Tssr122030 13 33843376 to 33843380 4 - TSS region transcription start site region 122030
Tssr122031 13 33843406 to 33843410 4 - TSS region transcription start site region 122031
Serpinb6c 13 33879816 to 33905708 25892 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6c
D13Mit136 13 33901015 to 33901109 94 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 136
Tssr122032 13 33905153 to 33905164 11 - TSS region transcription start site region 122032
Tssr122033 13 33905166 to 33905214 48 - TSS region transcription start site region 122033
Tssr122034 13 33905694 to 33905704 10 - TSS region transcription start site region 122034
Tssr122035 13 33905720 to 33905731 11 - TSS region transcription start site region 122035
Serpinb6a 13 33917918 to 34002794 84876 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6a
Tssr122036 13 33920896 to 33920899 3 - TSS region transcription start site region 122036
Tssr119195 13 33921311 to 33921323 12 + TSS region transcription start site region 119195
Tssr122037 13 33928394 to 33928398 4 - TSS region transcription start site region 122037
Cpgi5425 13 33935452 to 33936076 624 CpG island CpG island 5425
Tssr122038 13 33935700 to 33935724 24 - TSS region transcription start site region 122038
Tssr122039 13 33935758 to 33935769 11 - TSS region transcription start site region 122039
Tssr122040 13 33935782 to 33935832 50 - TSS region transcription start site region 122040
Tssr122041 13 33935833 to 33935861 28 - TSS region transcription start site region 122041
Tssr122042 13 33935969 to 33935986 17 - TSS region transcription start site region 122042
Tssr119196 13 33936027 to 33936075 48 + TSS region transcription start site region 119196
1110046J04Rik 13 33936032 to 33960181 24149 + antisense lncRNA gene RIKEN cDNA 1110046J04 gene
Tssr122043 13 33947691 to 33947695 4 - TSS region transcription start site region 122043
Tssr119197 13 33953202 to 33953215 13 + TSS region transcription start site region 119197
Tssr119198 13 33953231 to 33953242 11 + TSS region transcription start site region 119198
Tssr119199 13 33964663 to 33964674 11 + TSS region transcription start site region 119199
Tssr119200 13 33964684 to 33964704 20 + TSS region transcription start site region 119200
Nqo2 13 33964687 to 33988443 23756 + protein coding gene N-ribosyldihydronicotinamide quinone reductase 2
Tssr119201 13 33964708 to 33964750 42 + TSS region transcription start site region 119201
Tssr119202 13 33964764 to 33964771 7 + TSS region transcription start site region 119202
Tssr119203 13 33964935 to 33964967 32 + TSS region transcription start site region 119203
Tssr122044 13 33965690 to 33965711 21 - TSS region transcription start site region 122044
Tssr122045 13 33965720 to 33965727 7 - TSS region transcription start site region 122045