Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:32967665-35397683

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266 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Serpinb6b 13 32965209 to 32979067 13858 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6b
Tssr119161 13 32996969 to 32996989 20 + TSS region transcription start site region 119161
Tssr119162 13 32996998 to 32997011 13 + TSS region transcription start site region 119162
Gm47662 13 32997062 to 33001750 4688 + lincRNA gene predicted gene, 47662
Gm36181 13 33000998 to 33006525 5527 - lncRNA gene predicted gene, 36181
Tssr119163 13 33002040 to 33002068 28 + TSS region transcription start site region 119163
Tssr119164 13 33003158 to 33003178 20 + TSS region transcription start site region 119164
Tssr119165 13 33003222 to 33003257 35 + TSS region transcription start site region 119165
Serpinb9 13 33003250 to 33017957 14707 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9
Tssr119166 13 33003456 to 33003471 15 + TSS region transcription start site region 119166
Tssr119167 13 33004158 to 33004161 3 + TSS region transcription start site region 119167
Tssr119168 13 33004528 to 33004553 25 + TSS region transcription start site region 119168
Tssr119169 13 33004563 to 33004578 15 + TSS region transcription start site region 119169
Tssr119170 13 33004596 to 33004609 13 + TSS region transcription start site region 119170
Tssr119171 13 33004620 to 33004640 20 + TSS region transcription start site region 119171
Tssr119172 13 33013922 to 33013947 25 + TSS region transcription start site region 119172
Tssr119173 13 33015924 to 33015937 13 + TSS region transcription start site region 119173
Tssr119174 13 33016145 to 33016163 18 + TSS region transcription start site region 119174
Tssr119175 13 33016184 to 33016232 48 + TSS region transcription start site region 119175
Tssr119176 13 33017125 to 33017135 10 + TSS region transcription start site region 119176
Tssr119177 13 33027408 to 33027419 11 + TSS region transcription start site region 119177
Serpinb9b 13 33027414 to 33040559 13145 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9b
Tssr119178 13 33027502 to 33027513 11 + TSS region transcription start site region 119178
Tssr119179 13 33027532 to 33027547 15 + TSS region transcription start site region 119179
Gm36099 13 33031202 to 33034560 3358 - antisense lncRNA gene predicted gene, 36099
Tssr122020 13 33034632 to 33034648 16 - TSS region transcription start site region 122020
Tssr122021 13 33034651 to 33034663 12 - TSS region transcription start site region 122021
Tssr119180 13 33039828 to 33039842 14 + TSS region transcription start site region 119180
Tssr119181 13 33039898 to 33039917 19 + TSS region transcription start site region 119181
Tssr119182 13 33039945 to 33039954 9 + TSS region transcription start site region 119182
Tssr119183 13 33039971 to 33040005 34 + TSS region transcription start site region 119183
Tssr122022 13 33040032 to 33040043 11 - TSS region transcription start site region 122022
Tssr119184 13 33040056 to 33040074 18 + TSS region transcription start site region 119184
Tssr119185 13 33040260 to 33040297 37 + TSS region transcription start site region 119185
Tssr119186 13 33040361 to 33040371 10 + TSS region transcription start site region 119186
Tssr119187 13 33041003 to 33041009 6 + TSS region transcription start site region 119187
Gm18316 13 33065295 to 33066815 1520 + pseudogene predicted gene, 18316
Tssr4035 13 33078510 to 33078523 13 + TSS region transcription start site region 4035
Serpinb1b 13 33078575 to 33094380 15805 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1b
Tssr119188 13 33084049 to 33084058 9 + TSS region transcription start site region 119188
Tssr119189 13 33084061 to 33084072 11 + TSS region transcription start site region 119189
Tssr119190 13 33084095 to 33084104 9 + TSS region transcription start site region 119190
Tssr119191 13 33084113 to 33084146 33 + TSS region transcription start site region 119191
Gm11384 13 33105539 to 33133493 27954 - pseudogene predicted gene 11384
Gm11383 13 33120519 to 33121322 803 - pseudogene predicted gene 11383
Gm18708 13 33137574 to 33138240 666 - pseudogene predicted gene, 18708
Tssr4036 13 33139455 to 33139456 1 - TSS region transcription start site region 4036
Serpinb9c 13 33149275 to 33159742 10467 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9c
Tssr122023 13 33158362 to 33158374 12 - TSS region transcription start site region 122023
Tssr122024 13 33158394 to 33158417 23 - TSS region transcription start site region 122024
Tssr122025 13 33159737 to 33159755 18 - TSS region transcription start site region 122025
Tssr119192 13 33192952 to 33192964 12 + TSS region transcription start site region 119192
Serpinb9d 13 33192959 to 33203129 10170 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9d
Gm11385 13 33217268 to 33218151 883 - pseudogene predicted gene 11385
Gm47788 13 33237702 to 33238305 603 + pseudogene predicted gene, 47788
Serpinb9e 13 33249610 to 33260846 11236 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9e
Gm40905 13 33284223 to 33293474 9251 + lncRNA gene predicted gene, 40905
Serpinb9f 13 33324077 to 33335370 11293 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9f
Gm40906 13 33358862 to 33368110 9248 + lncRNA gene predicted gene, 40906
Gm11397 13 33395673 to 33405145 9472 + protein coding gene predicted gene 11397
Gm19155 13 33409104 to 33436782 27678 + pseudogene predicted gene, 19155
Tssr119193 13 33484784 to 33484787 3 + TSS region transcription start site region 119193
Serpinb9g 13 33484790 to 33496002 11212 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9g
Gm11387 13 33508172 to 33526311 18139 + pseudogene predicted gene 11387
Gm11386 13 33531613 to 33531935 322 - pseudogene predicted gene 11386
Gm11393 13 33542999 to 33550698 7699 + pseudogene predicted gene 11393
Tssr122026 13 33559681 to 33559690 9 - TSS region transcription start site region 122026
Gm6093 13 33562486 to 33569317 6831 - lincRNA gene predicted gene 6093
Tssr122027 13 33566242 to 33566252 10 - TSS region transcription start site region 122027
Gm25043 13 33567794 to 33568005 211 + ribozyme gene predicted gene, 25043
Gm47916 13 33569021 to 33572086 3065 + lincRNA gene predicted gene, 47916
Tssr122028 13 33569310 to 33569324 14 - TSS region transcription start site region 122028
Tssr122029 13 33569480 to 33569496 16 - TSS region transcription start site region 122029
Tssr4037 13 33569530 to 33569540 10 - TSS region transcription start site region 4037
Gm5194 13 33596035 to 33596776 741 - pseudogene predicted gene 5194
Gm11388 13 33641625 to 33641783 158 + pseudogene predicted gene 11388
Tssr119194 13 33661402 to 33661406 4 + TSS region transcription start site region 119194
Serpinb6d 13 33661405 to 33671581 10176 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6d
Gm11389 13 33686457 to 33689508 3051 + pseudogene predicted gene 11389
Gm26701 13 33700473 to 33701102 629 - pseudogene predicted gene, 26701
Gm11392 13 33718276 to 33722055 3779 + pseudogene predicted gene 11392
Gm11394 13 33729051 to 33729861 810 - pseudogene predicted gene 11394
Gm11395 13 33741240 to 33742038 798 + pseudogene predicted gene 11395
Vmn2r-ps94 13 33766992 to 33811610 44618 + pseudogene vomeronasal 2, receptor, pseudogene 94
Serpinb6e 13 33832345 to 33843408 11063 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6e
Tssr122030 13 33843376 to 33843380 4 - TSS region transcription start site region 122030
Tssr122031 13 33843406 to 33843410 4 - TSS region transcription start site region 122031
Serpinb6c 13 33879816 to 33905708 25892 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6c
D13Mit136 13 33901015 to 33901109 94 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 136
Tssr122032 13 33905153 to 33905164 11 - TSS region transcription start site region 122032
Tssr122033 13 33905166 to 33905214 48 - TSS region transcription start site region 122033
Tssr122034 13 33905694 to 33905704 10 - TSS region transcription start site region 122034
Tssr122035 13 33905720 to 33905731 11 - TSS region transcription start site region 122035
Serpinb6a 13 33917918 to 34002794 84876 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6a
Tssr122036 13 33920896 to 33920899 3 - TSS region transcription start site region 122036
Tssr119195 13 33921311 to 33921323 12 + TSS region transcription start site region 119195
Tssr122037 13 33928394 to 33928398 4 - TSS region transcription start site region 122037
Cpgi5425 13 33935452 to 33936076 624 CpG island CpG island 5425
Tssr122038 13 33935700 to 33935724 24 - TSS region transcription start site region 122038
Tssr122039 13 33935758 to 33935769 11 - TSS region transcription start site region 122039
Tssr122040 13 33935782 to 33935832 50 - TSS region transcription start site region 122040
Tssr122041 13 33935833 to 33935861 28 - TSS region transcription start site region 122041
Tssr122042 13 33935969 to 33935986 17 - TSS region transcription start site region 122042
Tssr119196 13 33936027 to 33936075 48 + TSS region transcription start site region 119196
1110046J04Rik 13 33936032 to 33960181 24149 + antisense lncRNA gene RIKEN cDNA 1110046J04 gene
Tssr122043 13 33947691 to 33947695 4 - TSS region transcription start site region 122043
Tssr119197 13 33953202 to 33953215 13 + TSS region transcription start site region 119197
Tssr119198 13 33953231 to 33953242 11 + TSS region transcription start site region 119198
Tssr119199 13 33964663 to 33964674 11 + TSS region transcription start site region 119199
Tssr119200 13 33964684 to 33964704 20 + TSS region transcription start site region 119200
Nqo2 13 33964687 to 33988443 23756 + protein coding gene N-ribosyldihydronicotinamide quinone reductase 2
Tssr119201 13 33964708 to 33964750 42 + TSS region transcription start site region 119201
Tssr119202 13 33964764 to 33964771 7 + TSS region transcription start site region 119202
Tssr119203 13 33964935 to 33964967 32 + TSS region transcription start site region 119203
Tssr122044 13 33965690 to 33965711 21 - TSS region transcription start site region 122044
Tssr122045 13 33965720 to 33965727 7 - TSS region transcription start site region 122045
Tssr119204 13 33967101 to 33967108 7 + TSS region transcription start site region 119204
Tssr122046 13 33967961 to 33967965 4 - TSS region transcription start site region 122046
Tssr119205 13 33979690 to 33979694 4 + TSS region transcription start site region 119205
Tssr4038 13 33985338 to 33985357 19 + TSS region transcription start site region 4038
Cpgi5426 13 34001918 to 34003192 1274 CpG island CpG island 5426
Ripk1 13 34002363 to 34035170 32807 + protein coding gene receptor (TNFRSF)-interacting serine-threonine kinase 1
Tssr119206 13 34002375 to 34002423 48 + TSS region transcription start site region 119206
Tssr119207 13 34002430 to 34002441 11 + TSS region transcription start site region 119207
Tssr122047 13 34002743 to 34002783 40 - TSS region transcription start site region 122047
Tssr122048 13 34002784 to 34002812 28 - TSS region transcription start site region 122048
Gm17083 13 34006966 to 34008331 1365 - pseudogene predicted gene 17083
Tssr119208 13 34010667 to 34010675 8 + TSS region transcription start site region 119208
Tssr119209 13 34021450 to 34021466 16 + TSS region transcription start site region 119209
Tssr119210 13 34021648 to 34021655 7 + TSS region transcription start site region 119210
Gm17084 13 34034526 to 34035036 510 + pseudogene predicted gene 17084
Cpgi5427 13 34037409 to 34037972 563 CpG island CpG island 5427
Tssr119211 13 34037581 to 34037587 6 + TSS region transcription start site region 119211
Tssr119212 13 34037591 to 34037605 14 + TSS region transcription start site region 119212
Bphl 13 34037597 to 34074074 36477 + protein coding gene biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)
Tssr119213 13 34037612 to 34037615 3 + TSS region transcription start site region 119213
Tssr119214 13 34037619 to 34037655 36 + TSS region transcription start site region 119214
Tssr119215 13 34037661 to 34037665 4 + TSS region transcription start site region 119215
Tssr119216 13 34037666 to 34037682 16 + TSS region transcription start site region 119216
Tssr4039 13 34046726 to 34046735 9 + TSS region transcription start site region 4039
Tssr119217 13 34046802 to 34046812 10 + TSS region transcription start site region 119217
Tssr119218 13 34046816 to 34046821 5 + TSS region transcription start site region 119218
Tssr122049 13 34050563 to 34050574 11 - TSS region transcription start site region 122049
Tubb2a 13 34074278 to 34078008 3730 - protein coding gene tubulin, beta 2A class IIA
Cpgi5428 13 34077668 to 34078310 642 CpG island CpG island 5428
Tssr122050 13 34077992 to 34078015 23 - TSS region transcription start site region 122050
4930447K03Rik 13 34084155 to 34113272 29117 - lncRNA gene RIKEN cDNA 4930447K03 gene
Gm47065 13 34087137 to 34089027 1890 - pseudogene predicted gene, 47065
Tssr119219 13 34090702 to 34090719 17 + TSS region transcription start site region 119219
Tssr122051 13 34113258 to 34113267 9 - TSS region transcription start site region 122051
Gm47076 13 34119701 to 34122465 2764 + lincRNA gene predicted gene, 47076
Tubb2b 13 34127008 to 34130354 3346 - protein coding gene tubulin, beta 2B class IIB
Tssr122052 13 34128422 to 34128455 33 - TSS region transcription start site region 122052
Cpgi5429 13 34129783 to 34130778 995 CpG island CpG island 5429
Tssr122053 13 34130345 to 34130361 16 - TSS region transcription start site region 122053
Tssr119220 13 34130584 to 34130606 22 + TSS region transcription start site region 119220
Cpgi5430 13 34131459 to 34131752 293 CpG island CpG island 5430
Gm36500 13 34133860 to 34137654 3794 + lincRNA gene predicted gene, 36500
Gm36549 13 34148432 to 34151024 2592 - lncRNA gene predicted gene, 36549
Cpgi5431 13 34162726 to 34163517 791 CpG island CpG island 5431
Tssr119221 13 34162953 to 34163033 80 + TSS region transcription start site region 119221
Psmg4 13 34162964 to 34178172 15208 + protein coding gene proteasome (prosome, macropain) assembly chaperone 4
Tssr119222 13 34163039 to 34163055 16 + TSS region transcription start site region 119222
Slc22a23 13 34179158 to 34345182 166024 - protein coding gene solute carrier family 22, member 23
Tssr122054 13 34182665 to 34182683 18 - TSS region transcription start site region 122054
2900079J23Rik 13 34196632 to 34196883 251 unclassified gene RIKEN cDNA 2900079J23 gene
Tssr122055 13 34246631 to 34246642 11 - TSS region transcription start site region 122055
Tssr122056 13 34246947 to 34246954 7 - TSS region transcription start site region 122056
Gm24530 13 34276965 to 34277252 287 - unclassified non-coding RNA gene predicted gene, 24530
Gm47086 13 34318808 to 34319217 409 + pseudogene predicted gene, 47086
Gm46407 13 34342722 to 34343456 734 + lncRNA gene predicted gene, 46407
Cpgi5432 13 34343772 to 34346023 2251 CpG island CpG island 5432
Tssr122057 13 34345174 to 34345273 99 - TSS region transcription start site region 122057
Tssr122058 13 34345639 to 34345674 35 - TSS region transcription start site region 122058
Tssr122059 13 34345979 to 34346012 33 - TSS region transcription start site region 122059
Tssr4040 13 34355403 to 34355415 12 - TSS region transcription start site region 4040
Gm6129 13 34393724 to 34394524 800 - pseudogene predicted gene 6129
Gm47120 13 34426230 to 34426431 201 - pseudogene predicted gene, 47120
D13Mit241 13 34439478 to 34439590 112 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 241
Gm40908 13 34459557 to 34482181 22624 - lncRNA gene predicted gene, 40908
Gm40909 13 34500728 to 34506511 5783 - lincRNA gene predicted gene, 40909
Gm36758 13 34561986 to 34562295 309 + pseudogene predicted gene, 36758
Gm47127 13 34610827 to 34612246 1419 - lincRNA gene predicted gene, 47127
Tssr4041 13 34627755 to 34627759 4 + TSS region transcription start site region 4041
Pxdc1 13 34627840 to 34653133 25293 - protein coding gene PX domain containing 1
Tssr122060 13 34628318 to 34628325 7 - TSS region transcription start site region 122060
Tssr122061 13 34649471 to 34649474 3 - TSS region transcription start site region 122061
Cpgi5433 13 34651470 to 34653341 1871 CpG island CpG island 5433
Tssr122062 13 34652642 to 34652649 7 - TSS region transcription start site region 122062
Tssr122063 13 34652673 to 34652688 15 - TSS region transcription start site region 122063
Tssr122064 13 34652883 to 34652896 13 - TSS region transcription start site region 122064
Tssr122065 13 34652898 to 34652925 27 - TSS region transcription start site region 122065
Tssr119223 13 34652910 to 34652941 31 + TSS region transcription start site region 119223
Gm15908 13 34652923 to 34666774 13851 + antisense lncRNA gene predicted gene 15908
Tssr122066 13 34652933 to 34652976 43 - TSS region transcription start site region 122066
Tssr122067 13 34653083 to 34653114 31 - TSS region transcription start site region 122067
Gm47149 13 34680733 to 34680921 188 - pseudogene predicted gene, 47149
Gm47150 13 34711449 to 34715030 3581 + lincRNA gene predicted gene, 47150
Tssr122068 13 34715488 to 34715492 4 - TSS region transcription start site region 122068
Gm47151 13 34718056 to 34720751 2695 - lincRNA gene predicted gene, 47151