Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:32779049-33389058

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mylk4 13 32700834 to 32783954 83120 - protein coding gene myosin light chain kinase family, member 4
Tssr122004 13 32783903 to 32783914 11 - TSS region transcription start site region 122004
Tssr122005 13 32783917 to 32783929 12 - TSS region transcription start site region 122005
Tssr122006 13 32783934 to 32783946 12 - TSS region transcription start site region 122006
Tssr122007 13 32783957 to 32783975 18 - TSS region transcription start site region 122007
Tssr122008 13 32783994 to 32784007 13 - TSS region transcription start site region 122008
Tssr122009 13 32784025 to 32784042 17 - TSS region transcription start site region 122009
D13Cwr1 13 32794840 to 32795073 233 DNA segment DNA segment, Chr. 13, Case Western Reserve 1
Cpgi5424 13 32801702 to 32803248 1546 CpG island CpG island 5424
Tssr119151 13 32802007 to 32802152 145 + TSS region transcription start site region 119151
Wrnip1 13 32802038 to 32822609 20571 + protein coding gene Werner helicase interacting protein 1
D930007J09Rik 13 32802457 to 32802849 392 - protein coding gene RIKEN cDNA D930007J09 gene
Tssr122010 13 32806960 to 32806978 18 - TSS region transcription start site region 122010
Tssr122011 13 32806984 to 32807020 36 - TSS region transcription start site region 122011
Serpinb1a 13 32842092 to 32851185 9093 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1a
Tssr122012 13 32845805 to 32845816 11 - TSS region transcription start site region 122012
Tssr122013 13 32851176 to 32851186 10 - TSS region transcription start site region 122013
Serpinb1-ps1 13 32859959 to 32863170 3211 - pseudogene serine (or cysteine) peptidase inhibitor, clade B, member 1, pseudogene
Tssr119152 13 32860960 to 32860967 7 + TSS region transcription start site region 119152
Tssr119153 13 32861009 to 32861021 12 + TSS region transcription start site region 119153
Gm35899 13 32865053 to 32870912 5859 + lncRNA gene predicted gene, 35899
Serpinb1c 13 32881434 to 32898211 16777 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1c
Tssr122014 13 32898147 to 32898160 13 - TSS region transcription start site region 122014
Gm18311 13 32923221 to 32924494 1273 - pseudogene predicted gene, 18311
Tssr122015 13 32932415 to 32932439 24 - TSS region transcription start site region 122015
Gm11382 13 32938513 to 32938691 178 - pseudogene predicted pseudogene 11382
Tssr122016 13 32939319 to 32939330 11 - TSS region transcription start site region 122016
Tssr122017 13 32940586 to 32940622 36 - TSS region transcription start site region 122017
Tssr122018 13 32940625 to 32940638 13 - TSS region transcription start site region 122018
Tssr119154 13 32956783 to 32956816 33 + TSS region transcription start site region 119154
Tssr122019 13 32964052 to 32964062 10 - TSS region transcription start site region 122019
Serpinb6b 13 32965209 to 32979067 13858 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6b
Tssr119155 13 32965254 to 32965267 13 + TSS region transcription start site region 119155
Tssr119156 13 32965272 to 32965283 11 + TSS region transcription start site region 119156
Tssr119157 13 32965303 to 32965317 14 + TSS region transcription start site region 119157
Tssr119158 13 32965323 to 32965330 7 + TSS region transcription start site region 119158
Tssr119159 13 32965494 to 32965511 17 + TSS region transcription start site region 119159
Tssr119160 13 32965693 to 32965712 19 + TSS region transcription start site region 119160
Tssr119161 13 32996969 to 32996989 20 + TSS region transcription start site region 119161
Tssr119162 13 32996998 to 32997011 13 + TSS region transcription start site region 119162
Gm47662 13 32997062 to 33001750 4688 + lincRNA gene predicted gene, 47662
Gm36181 13 33000998 to 33006525 5527 - lncRNA gene predicted gene, 36181
Tssr119163 13 33002040 to 33002068 28 + TSS region transcription start site region 119163
Tssr119164 13 33003158 to 33003178 20 + TSS region transcription start site region 119164
Tssr119165 13 33003222 to 33003257 35 + TSS region transcription start site region 119165
Serpinb9 13 33003250 to 33017957 14707 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9
Tssr119166 13 33003456 to 33003471 15 + TSS region transcription start site region 119166
Tssr119167 13 33004158 to 33004161 3 + TSS region transcription start site region 119167
Tssr119168 13 33004528 to 33004553 25 + TSS region transcription start site region 119168
Tssr119169 13 33004563 to 33004578 15 + TSS region transcription start site region 119169
Tssr119170 13 33004596 to 33004609 13 + TSS region transcription start site region 119170
Tssr119171 13 33004620 to 33004640 20 + TSS region transcription start site region 119171
Tssr119172 13 33013922 to 33013947 25 + TSS region transcription start site region 119172
Tssr119173 13 33015924 to 33015937 13 + TSS region transcription start site region 119173
Tssr119174 13 33016145 to 33016163 18 + TSS region transcription start site region 119174
Tssr119175 13 33016184 to 33016232 48 + TSS region transcription start site region 119175
Tssr119176 13 33017125 to 33017135 10 + TSS region transcription start site region 119176
Tssr119177 13 33027408 to 33027419 11 + TSS region transcription start site region 119177
Serpinb9b 13 33027414 to 33040559 13145 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9b
Tssr119178 13 33027502 to 33027513 11 + TSS region transcription start site region 119178
Tssr119179 13 33027532 to 33027547 15 + TSS region transcription start site region 119179
Gm36099 13 33031202 to 33034560 3358 - antisense lncRNA gene predicted gene, 36099
Tssr122020 13 33034632 to 33034648 16 - TSS region transcription start site region 122020
Tssr122021 13 33034651 to 33034663 12 - TSS region transcription start site region 122021
Tssr119180 13 33039828 to 33039842 14 + TSS region transcription start site region 119180
Tssr119181 13 33039898 to 33039917 19 + TSS region transcription start site region 119181
Tssr119182 13 33039945 to 33039954 9 + TSS region transcription start site region 119182
Tssr119183 13 33039971 to 33040005 34 + TSS region transcription start site region 119183
Tssr122022 13 33040032 to 33040043 11 - TSS region transcription start site region 122022
Tssr119184 13 33040056 to 33040074 18 + TSS region transcription start site region 119184
Tssr119185 13 33040260 to 33040297 37 + TSS region transcription start site region 119185
Tssr119186 13 33040361 to 33040371 10 + TSS region transcription start site region 119186
Tssr119187 13 33041003 to 33041009 6 + TSS region transcription start site region 119187
Gm18316 13 33065295 to 33066815 1520 + pseudogene predicted gene, 18316
Tssr4035 13 33078510 to 33078523 13 + TSS region transcription start site region 4035
Serpinb1b 13 33078575 to 33094380 15805 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1b
Tssr119188 13 33084049 to 33084058 9 + TSS region transcription start site region 119188
Tssr119189 13 33084061 to 33084072 11 + TSS region transcription start site region 119189
Tssr119190 13 33084095 to 33084104 9 + TSS region transcription start site region 119190
Tssr119191 13 33084113 to 33084146 33 + TSS region transcription start site region 119191
Gm11384 13 33105539 to 33133493 27954 - pseudogene predicted gene 11384
Gm11383 13 33120519 to 33121322 803 - pseudogene predicted gene 11383
Gm18708 13 33137574 to 33138240 666 - pseudogene predicted gene, 18708
Tssr4036 13 33139455 to 33139456 1 - TSS region transcription start site region 4036
Serpinb9c 13 33149275 to 33159742 10467 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9c
Tssr122023 13 33158362 to 33158374 12 - TSS region transcription start site region 122023
Tssr122024 13 33158394 to 33158417 23 - TSS region transcription start site region 122024
Tssr122025 13 33159737 to 33159755 18 - TSS region transcription start site region 122025
Tssr119192 13 33192952 to 33192964 12 + TSS region transcription start site region 119192
Serpinb9d 13 33192959 to 33203129 10170 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9d
Gm11385 13 33217268 to 33218151 883 - pseudogene predicted gene 11385
Gm47788 13 33237702 to 33238305 603 + pseudogene predicted gene, 47788
Serpinb9e 13 33249610 to 33260846 11236 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9e
Gm40905 13 33284223 to 33293474 9251 + lncRNA gene predicted gene, 40905
Serpinb9f 13 33324077 to 33335370 11293 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9f
Gm40906 13 33358862 to 33368110 9248 + lncRNA gene predicted gene, 40906