Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:32373489-33033515

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm11381 13 32379907 to 32383688 3781 - lincRNA gene predicted gene 11381
D13Cwr11 13 32425183 to 32425291 108 DNA segment DNA segment, Chr. 13, Case Western Reserve 11
Tssr119150 13 32465446 to 32465460 14 + TSS region transcription start site region 119150
Gm40876 13 32465453 to 32493376 27923 + lncRNA gene predicted gene, 40876
D13Cwr10 13 32494253 to 32494406 153 DNA segment DNA segment, Chr. 13, Case Western Reserve 10
D13Cwr9 13 32513012 to 32513205 193 DNA segment DNA segment, Chr. 13, Case Western Reserve 9
Gm48073 13 32532919 to 32536415 3496 - lincRNA gene predicted gene, 48073
D13Cwr8 13 32536279 to 32536375 96 DNA segment DNA segment, Chr. 13, Case Western Reserve 8
D13Cwr7 13 32536706 to 32536889 183 DNA segment DNA segment, Chr. 13, Case Western Reserve 7
D13Cwr6 13 32554180 to 32554394 214 DNA segment DNA segment, Chr. 13, Case Western Reserve 6
D13Cwr5 13 32607337 to 32607580 243 DNA segment DNA segment, Chr. 13, Case Western Reserve 5
D13Cwr4 13 32611098 to 32611327 229 DNA segment DNA segment, Chr. 13, Case Western Reserve 4
D13Mit307 13 32655602 to 32655706 104 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 307
D13Cwr3 13 32674056 to 32674239 183 DNA segment DNA segment, Chr. 13, Case Western Reserve 3
Mylk4 13 32700834 to 32783954 83120 - protein coding gene myosin light chain kinase family, member 4
Tssr121998 13 32701707 to 32701726 19 - TSS region transcription start site region 121998
D13Cwr2 13 32702775 to 32702918 143 DNA segment DNA segment, Chr. 13, Case Western Reserve 2
Tssr121999 13 32703489 to 32703515 26 - TSS region transcription start site region 121999
2310045N14Rik 13 32725850 to 32726971 1121 unclassified gene RIKEN cDNA 2310045N14 gene
Gm27342 13 32758202 to 32758310 108 + snRNA gene predicted gene, 27342
D13Mit265 13 32770541 to 32770650 109 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 265
Cpgi5423 13 32776171 to 32776448 277 CpG island CpG island 5423
Tssr122000 13 32776396 to 32776425 29 - TSS region transcription start site region 122000
Tssr122001 13 32776435 to 32776446 11 - TSS region transcription start site region 122001
Tssr122002 13 32776464 to 32776477 13 - TSS region transcription start site region 122002
Tssr122003 13 32776543 to 32776558 15 - TSS region transcription start site region 122003
Tssr122004 13 32783903 to 32783914 11 - TSS region transcription start site region 122004
Tssr122005 13 32783917 to 32783929 12 - TSS region transcription start site region 122005
Tssr122006 13 32783934 to 32783946 12 - TSS region transcription start site region 122006
Tssr122007 13 32783957 to 32783975 18 - TSS region transcription start site region 122007
Tssr122008 13 32783994 to 32784007 13 - TSS region transcription start site region 122008
Tssr122009 13 32784025 to 32784042 17 - TSS region transcription start site region 122009
D13Cwr1 13 32794840 to 32795073 233 DNA segment DNA segment, Chr. 13, Case Western Reserve 1
Cpgi5424 13 32801702 to 32803248 1546 CpG island CpG island 5424
Tssr119151 13 32802007 to 32802152 145 + TSS region transcription start site region 119151
Wrnip1 13 32802038 to 32822609 20571 + protein coding gene Werner helicase interacting protein 1
D930007J09Rik 13 32802457 to 32802849 392 - protein coding gene RIKEN cDNA D930007J09 gene
Tssr122010 13 32806960 to 32806978 18 - TSS region transcription start site region 122010
Tssr122011 13 32806984 to 32807020 36 - TSS region transcription start site region 122011
Serpinb1a 13 32842092 to 32851185 9093 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1a
Tssr122012 13 32845805 to 32845816 11 - TSS region transcription start site region 122012
Tssr122013 13 32851176 to 32851186 10 - TSS region transcription start site region 122013
Serpinb1-ps1 13 32859959 to 32863170 3211 - pseudogene serine (or cysteine) peptidase inhibitor, clade B, member 1, pseudogene
Tssr119152 13 32860960 to 32860967 7 + TSS region transcription start site region 119152
Tssr119153 13 32861009 to 32861021 12 + TSS region transcription start site region 119153
Gm35899 13 32865053 to 32870912 5859 + lncRNA gene predicted gene, 35899
Serpinb1c 13 32881434 to 32898211 16777 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1c
Tssr122014 13 32898147 to 32898160 13 - TSS region transcription start site region 122014
Gm18311 13 32923221 to 32924494 1273 - pseudogene predicted gene, 18311
Tssr122015 13 32932415 to 32932439 24 - TSS region transcription start site region 122015
Gm11382 13 32938513 to 32938691 178 - pseudogene predicted pseudogene 11382
Tssr122016 13 32939319 to 32939330 11 - TSS region transcription start site region 122016
Tssr122017 13 32940586 to 32940622 36 - TSS region transcription start site region 122017
Tssr122018 13 32940625 to 32940638 13 - TSS region transcription start site region 122018
Tssr119154 13 32956783 to 32956816 33 + TSS region transcription start site region 119154
Tssr122019 13 32964052 to 32964062 10 - TSS region transcription start site region 122019
Serpinb6b 13 32965209 to 32979067 13858 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6b
Tssr119155 13 32965254 to 32965267 13 + TSS region transcription start site region 119155
Tssr119156 13 32965272 to 32965283 11 + TSS region transcription start site region 119156
Tssr119157 13 32965303 to 32965317 14 + TSS region transcription start site region 119157
Tssr119158 13 32965323 to 32965330 7 + TSS region transcription start site region 119158
Tssr119159 13 32965494 to 32965511 17 + TSS region transcription start site region 119159
Tssr119160 13 32965693 to 32965712 19 + TSS region transcription start site region 119160
Tssr119161 13 32996969 to 32996989 20 + TSS region transcription start site region 119161
Tssr119162 13 32996998 to 32997011 13 + TSS region transcription start site region 119162
Gm47662 13 32997062 to 33001750 4688 + lincRNA gene predicted gene, 47662
Gm36181 13 33000998 to 33006525 5527 - lncRNA gene predicted gene, 36181
Tssr119163 13 33002040 to 33002068 28 + TSS region transcription start site region 119163
Tssr119164 13 33003158 to 33003178 20 + TSS region transcription start site region 119164
Tssr119165 13 33003222 to 33003257 35 + TSS region transcription start site region 119165
Serpinb9 13 33003250 to 33017957 14707 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9
Tssr119166 13 33003456 to 33003471 15 + TSS region transcription start site region 119166
Tssr119167 13 33004158 to 33004161 3 + TSS region transcription start site region 119167
Tssr119168 13 33004528 to 33004553 25 + TSS region transcription start site region 119168
Tssr119169 13 33004563 to 33004578 15 + TSS region transcription start site region 119169
Tssr119170 13 33004596 to 33004609 13 + TSS region transcription start site region 119170
Tssr119171 13 33004620 to 33004640 20 + TSS region transcription start site region 119171
Tssr119172 13 33013922 to 33013947 25 + TSS region transcription start site region 119172
Tssr119173 13 33015924 to 33015937 13 + TSS region transcription start site region 119173
Tssr119174 13 33016145 to 33016163 18 + TSS region transcription start site region 119174
Tssr119175 13 33016184 to 33016232 48 + TSS region transcription start site region 119175
Tssr119176 13 33017125 to 33017135 10 + TSS region transcription start site region 119176
Tssr119177 13 33027408 to 33027419 11 + TSS region transcription start site region 119177
Serpinb9b 13 33027414 to 33040559 13145 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 9b
Tssr119178 13 33027502 to 33027513 11 + TSS region transcription start site region 119178
Tssr119179 13 33027532 to 33027547 15 + TSS region transcription start site region 119179
Gm36099 13 33031202 to 33034560 3358 - antisense lncRNA gene predicted gene, 36099