Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:31980453-32978376

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gmds 13 31819583 to 32338725 519142 - protein coding gene GDP-mannose 4, 6-dehydratase
Tssr121993 13 31984823 to 31984827 4 - TSS region transcription start site region 121993
Gm35672 13 32007295 to 32092787 85492 + lncRNA gene predicted gene, 35672
D13Cwr15 13 32013512 to 32013704 192 DNA segment DNA segment, Chr. 13, Case Western Reserve 15
D13Cwr12 13 32067534 to 32067711 177 DNA segment DNA segment, Chr. 13, Case Western Reserve 12
Gm48885 13 32095279 to 32099175 3896 - unclassified gene predicted gene, 48885
Tssr121994 13 32214100 to 32214127 27 - TSS region transcription start site region 121994
Tssr4034 13 32214147 to 32214152 5 - TSS region transcription start site region 4034
Cpgi5422 13 32337948 to 32338955 1007 CpG island CpG island 5422
Tssr121995 13 32338500 to 32338542 42 - TSS region transcription start site region 121995
Tssr121996 13 32338554 to 32338564 10 - TSS region transcription start site region 121996
Tssr121997 13 32338565 to 32338660 95 - TSS region transcription start site region 121997
A730091E23Rik 13 32338819 to 32342643 3824 + unclassified gene RIKEN cDNA A730091E23 gene
Gm11381 13 32379907 to 32383688 3781 - lincRNA gene predicted gene 11381
D13Cwr11 13 32425183 to 32425291 108 DNA segment DNA segment, Chr. 13, Case Western Reserve 11
Tssr119150 13 32465446 to 32465460 14 + TSS region transcription start site region 119150
Gm40876 13 32465453 to 32493376 27923 + lncRNA gene predicted gene, 40876
D13Cwr10 13 32494253 to 32494406 153 DNA segment DNA segment, Chr. 13, Case Western Reserve 10
D13Cwr9 13 32513012 to 32513205 193 DNA segment DNA segment, Chr. 13, Case Western Reserve 9
Gm48073 13 32532919 to 32536415 3496 - lincRNA gene predicted gene, 48073
D13Cwr8 13 32536279 to 32536375 96 DNA segment DNA segment, Chr. 13, Case Western Reserve 8
D13Cwr7 13 32536706 to 32536889 183 DNA segment DNA segment, Chr. 13, Case Western Reserve 7
D13Cwr6 13 32554180 to 32554394 214 DNA segment DNA segment, Chr. 13, Case Western Reserve 6
D13Cwr5 13 32607337 to 32607580 243 DNA segment DNA segment, Chr. 13, Case Western Reserve 5
D13Cwr4 13 32611098 to 32611327 229 DNA segment DNA segment, Chr. 13, Case Western Reserve 4
D13Mit307 13 32655602 to 32655706 104 DNA segment DNA Segment, Chr 13 Massachusetts Institute of Technology 307
D13Cwr3 13 32674056 to 32674239 183 DNA segment DNA segment, Chr. 13, Case Western Reserve 3
Mylk4 13 32700834 to 32783954 83120 - protein coding gene myosin light chain kinase family, member 4
Tssr121998 13 32701707 to 32701726 19 - TSS region transcription start site region 121998
D13Cwr2 13 32702775 to 32702918 143 DNA segment DNA segment, Chr. 13, Case Western Reserve 2
Tssr121999 13 32703489 to 32703515 26 - TSS region transcription start site region 121999
2310045N14Rik 13 32725850 to 32726971 1121 unclassified gene RIKEN cDNA 2310045N14 gene
Gm27342 13 32758202 to 32758310 108 + snRNA gene predicted gene, 27342
D13Mit265 13 32770541 to 32770650 109 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 265
Cpgi5423 13 32776171 to 32776448 277 CpG island CpG island 5423
Tssr122000 13 32776396 to 32776425 29 - TSS region transcription start site region 122000
Tssr122001 13 32776435 to 32776446 11 - TSS region transcription start site region 122001
Tssr122002 13 32776464 to 32776477 13 - TSS region transcription start site region 122002
Tssr122003 13 32776543 to 32776558 15 - TSS region transcription start site region 122003
Tssr122004 13 32783903 to 32783914 11 - TSS region transcription start site region 122004
Tssr122005 13 32783917 to 32783929 12 - TSS region transcription start site region 122005
Tssr122006 13 32783934 to 32783946 12 - TSS region transcription start site region 122006
Tssr122007 13 32783957 to 32783975 18 - TSS region transcription start site region 122007
Tssr122008 13 32783994 to 32784007 13 - TSS region transcription start site region 122008
Tssr122009 13 32784025 to 32784042 17 - TSS region transcription start site region 122009
D13Cwr1 13 32794840 to 32795073 233 DNA segment DNA segment, Chr. 13, Case Western Reserve 1
Cpgi5424 13 32801702 to 32803248 1546 CpG island CpG island 5424
Tssr119151 13 32802007 to 32802152 145 + TSS region transcription start site region 119151
Wrnip1 13 32802038 to 32822609 20571 + protein coding gene Werner helicase interacting protein 1
D930007J09Rik 13 32802457 to 32802849 392 - protein coding gene RIKEN cDNA D930007J09 gene
Tssr122010 13 32806960 to 32806978 18 - TSS region transcription start site region 122010
Tssr122011 13 32806984 to 32807020 36 - TSS region transcription start site region 122011
Serpinb1a 13 32842092 to 32851185 9093 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1a
Tssr122012 13 32845805 to 32845816 11 - TSS region transcription start site region 122012
Tssr122013 13 32851176 to 32851186 10 - TSS region transcription start site region 122013
Serpinb1-ps1 13 32859959 to 32863170 3211 - pseudogene serine (or cysteine) peptidase inhibitor, clade B, member 1, pseudogene
Tssr119152 13 32860960 to 32860967 7 + TSS region transcription start site region 119152
Tssr119153 13 32861009 to 32861021 12 + TSS region transcription start site region 119153
Gm35899 13 32865053 to 32870912 5859 + lncRNA gene predicted gene, 35899
Serpinb1c 13 32881434 to 32898211 16777 - protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 1c
Tssr122014 13 32898147 to 32898160 13 - TSS region transcription start site region 122014
Gm18311 13 32923221 to 32924494 1273 - pseudogene predicted gene, 18311
Tssr122015 13 32932415 to 32932439 24 - TSS region transcription start site region 122015
Gm11382 13 32938513 to 32938691 178 - pseudogene predicted pseudogene 11382
Tssr122016 13 32939319 to 32939330 11 - TSS region transcription start site region 122016
Tssr122017 13 32940586 to 32940622 36 - TSS region transcription start site region 122017
Tssr122018 13 32940625 to 32940638 13 - TSS region transcription start site region 122018
Tssr119154 13 32956783 to 32956816 33 + TSS region transcription start site region 119154
Tssr122019 13 32964052 to 32964062 10 - TSS region transcription start site region 122019
Serpinb6b 13 32965209 to 32979067 13858 + protein coding gene serine (or cysteine) peptidase inhibitor, clade B, member 6b
Tssr119155 13 32965254 to 32965267 13 + TSS region transcription start site region 119155
Tssr119156 13 32965272 to 32965283 11 + TSS region transcription start site region 119156
Tssr119157 13 32965303 to 32965317 14 + TSS region transcription start site region 119157
Tssr119158 13 32965323 to 32965330 7 + TSS region transcription start site region 119158
Tssr119159 13 32965494 to 32965511 17 + TSS region transcription start site region 119159
Tssr119160 13 32965693 to 32965712 19 + TSS region transcription start site region 119160