Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:2920797-3420804

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm8598 13 3008720 to 3009555 835 + pseudogene predicted gene 8598
Gm49287 13 3082155 to 3082275 120 + pseudogene predicted gene, 49287
Gm17177 13 3086434 to 3123319 36885 + pseudogene predicted gene 17177
Gm46400 13 3116916 to 3119562 2646 - lincRNA gene predicted gene, 46400
Gm18783 13 3124308 to 3125458 1150 - pseudogene predicted gene, 18783
Gm48519 13 3134649 to 3135145 496 - pseudogene predicted gene, 48519
Gm4900 13 3138485 to 3140112 1627 - pseudogene predicted gene 4900
Cpgi5239 13 3139353 to 3139607 254 CpG island CpG island 5239
Tssr121272 13 3139682 to 3139718 36 - TSS region transcription start site region 121272
Tssr121273 13 3140151 to 3140164 13 - TSS region transcription start site region 121273
Gm48520 13 3141356 to 3141503 147 - pseudogene predicted gene, 48520
Speer6-ps1 13 3149475 to 3189678 40203 + pseudogene spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1
Gm40644 13 3149559 to 3169709 20150 - lncRNA gene predicted gene, 40644
Tssr121274 13 3170797 to 3170804 7 - TSS region transcription start site region 121274
Gm40648 13 3202644 to 3216688 14044 - lncRNA gene predicted gene, 40648
Gm35043 13 3267594 to 3358601 91007 - lncRNA gene predicted gene, 35043
Gm40653 13 3276850 to 3282376 5526 + lincRNA gene predicted gene, 40653
Tssr118193 13 3298864 to 3298875 11 + TSS region transcription start site region 118193
Gm9616 13 3298887 to 3299667 780 + pseudogene predicted gene 9616
Gm48530 13 3325296 to 3358455 33159 - lincRNA gene predicted gene, 48530
Gm8616 13 3352952 to 3353988 1036 + pseudogene predicted gene 8616
Cpgi5240 13 3358210 to 3360229 2019 CpG island CpG island 5240
Gm16505 13 3358273 to 3363862 5589 + protein coding gene predicted gene 16505
Cpgi5241 13 3360506 to 3361411 905 CpG island CpG island 5241
Cpgi5242 13 3372913 to 3373551 638 CpG island CpG island 5242