Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:28951267-29081303

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26735 13 28943048 to 28951671 8623 + lincRNA gene predicted gene, 26735
Gm46405 13 28945177 to 28959261 14084 - lncRNA gene predicted gene, 46405
Sox4 13 28950716 to 28953682 2966 - protein coding gene SRY (sex determining region Y)-box 4
Cpgi5398 13 28951412 to 28953984 2572 CpG island CpG island 5398
Tssr119058 13 28951436 to 28951477 41 + TSS region transcription start site region 119058
Tssr121917 13 28951439 to 28951452 13 - TSS region transcription start site region 121917
Tssr119059 13 28951520 to 28951541 21 + TSS region transcription start site region 119059
Tssr119060 13 28951566 to 28951577 11 + TSS region transcription start site region 119060
Tssr119061 13 28951644 to 28951648 4 + TSS region transcription start site region 119061
Tssr121918 13 28951667 to 28951687 20 - TSS region transcription start site region 121918
Tssr121919 13 28951854 to 28951868 14 - TSS region transcription start site region 121919
Tssr121920 13 28952566 to 28952573 7 - TSS region transcription start site region 121920
Tssr121921 13 28952879 to 28952897 18 - TSS region transcription start site region 121921
Tssr121922 13 28953006 to 28953059 53 - TSS region transcription start site region 121922
Tssr121923 13 28953262 to 28953290 28 - TSS region transcription start site region 121923
Tssr121924 13 28953305 to 28953319 14 - TSS region transcription start site region 121924
Tssr121925 13 28953383 to 28953402 19 - TSS region transcription start site region 121925
Tssr121926 13 28953405 to 28953424 19 - TSS region transcription start site region 121926
Tssr121927 13 28953427 to 28953438 11 - TSS region transcription start site region 121927
Tssr121928 13 28953439 to 28953449 10 - TSS region transcription start site region 121928
Tssr121929 13 28953452 to 28953468 16 - TSS region transcription start site region 121929
Tssr121930 13 28953690 to 28953705 15 - TSS region transcription start site region 121930
Tssr119062 13 28953914 to 28953920 6 + TSS region transcription start site region 119062
Cpgi5399 13 28957924 to 28959942 2018 CpG island CpG island 5399
Tssr119063 13 29014305 to 29014324 19 + TSS region transcription start site region 119063
Tssr119064 13 29014406 to 29014411 5 + TSS region transcription start site region 119064
A330102I10Rik 13 29014414 to 29040336 25922 + lincRNA gene RIKEN cDNA A330102I10 gene
Cpgi5400 13 29016163 to 29016327 164 CpG island CpG island 5400
Tssr119065 13 29016267 to 29016303 36 + TSS region transcription start site region 119065
D13Mit83 13 29053566 to 29053689 123 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 83