Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:28820288-28950320

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2610307P16Rik 13 28460034 to 28885422 425388 - lncRNA gene RIKEN cDNA 2610307P16 gene
Gm17528 13 28827123 to 28827362 239 + pseudogene predicted gene, 17528
Tssr121892 13 28836089 to 28836094 5 - TSS region transcription start site region 121892
Gm11362 13 28836875 to 28837724 849 + pseudogene predicted gene 11362
Tssr119055 13 28839390 to 28839398 8 + TSS region transcription start site region 119055
5930430O07Rik 13 28860704 to 28863845 3141 unclassified gene RIKEN cDNA 5930430O07 gene
Tssr119056 13 28874292 to 28874296 4 + TSS region transcription start site region 119056
Cpgi5395 13 28884152 to 28884440 288 CpG island CpG island 5395
Tssr121893 13 28884219 to 28884244 25 - TSS region transcription start site region 121893
Tssr121894 13 28884252 to 28884306 54 - TSS region transcription start site region 121894
Tssr121895 13 28884682 to 28884691 9 - TSS region transcription start site region 121895
Cpgi5396 13 28885040 to 28885329 289 CpG island CpG island 5396
Tssr121896 13 28885288 to 28885320 32 - TSS region transcription start site region 121896
Tssr121897 13 28885334 to 28885382 48 - TSS region transcription start site region 121897
Tssr121898 13 28885616 to 28885633 17 - TSS region transcription start site region 121898
Gm34639 13 28889554 to 28898671 9117 - lincRNA gene predicted gene, 34639
Tssr4025 13 28901858 to 28901861 3 + TSS region transcription start site region 4025
Gm34697 13 28905604 to 28909600 3996 - lncRNA gene predicted gene, 34697
Cpgi5397 13 28909489 to 28909797 308 CpG island CpG island 5397
Tssr119057 13 28912025 to 28912026 1 + TSS region transcription start site region 119057
Gm40858 13 28912736 to 28916770 4034 - lncRNA gene predicted gene, 40858
Gm26735 13 28943048 to 28951671 8623 + lincRNA gene predicted gene, 26735
Gm46405 13 28945177 to 28959261 14084 - lncRNA gene predicted gene, 46405
Gm46406 13 28945388 to 28948106 2718 + lncRNA gene predicted gene, 46406
Tssr121899 13 28949136 to 28949147 11 - TSS region transcription start site region 121899
Tssr121900 13 28949151 to 28949172 21 - TSS region transcription start site region 121900
Tssr121901 13 28949380 to 28949392 12 - TSS region transcription start site region 121901
Tssr121902 13 28949581 to 28949593 12 - TSS region transcription start site region 121902
Tssr121903 13 28950021 to 28950030 9 - TSS region transcription start site region 121903
Tssr121904 13 28950062 to 28950078 16 - TSS region transcription start site region 121904
Tssr121905 13 28950124 to 28950135 11 - TSS region transcription start site region 121905
Tssr121906 13 28950151 to 28950162 11 - TSS region transcription start site region 121906
Tssr121907 13 28950181 to 28950218 37 - TSS region transcription start site region 121907
Tssr121908 13 28950238 to 28950249 11 - TSS region transcription start site region 121908
Tssr121909 13 28950274 to 28950298 24 - TSS region transcription start site region 121909
Tssr121910 13 28950312 to 28950326 14 - TSS region transcription start site region 121910