MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 13:2876434-3333319

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20 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm8598	13	3008720 to 3009555	835	+	pseudogene	predicted gene 8598
Gm49287	13	3082155 to 3082275	120	+	pseudogene	predicted gene, 49287
Gm17177	13	3086434 to 3123319	36885	+	pseudogene	predicted gene 17177
Gm46400	13	3116916 to 3119562	2646	-	lincRNA gene	predicted gene, 46400
Gm18783	13	3124308 to 3125458	1150	-	pseudogene	predicted gene, 18783
Gm48519	13	3134649 to 3135145	496	-	pseudogene	predicted gene, 48519
Gm4900	13	3138485 to 3140112	1627	-	pseudogene	predicted gene 4900
Cpgi5239	13	3139353 to 3139607	254		CpG island	CpG island 5239
Tssr121272	13	3139682 to 3139718	36	-	TSS region	transcription start site region 121272
Tssr121273	13	3140151 to 3140164	13	-	TSS region	transcription start site region 121273
Gm48520	13	3141356 to 3141503	147	-	pseudogene	predicted gene, 48520
Speer6-ps1	13	3149475 to 3189678	40203	+	pseudogene	spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1
Gm40644	13	3149559 to 3169709	20150	-	lncRNA gene	predicted gene, 40644
Tssr121274	13	3170797 to 3170804	7	-	TSS region	transcription start site region 121274
Gm40648	13	3202644 to 3216688	14044	-	lncRNA gene	predicted gene, 40648
Gm35043	13	3267594 to 3358601	91007	-	lncRNA gene	predicted gene, 35043
Gm40653	13	3276850 to 3282376	5526	+	lincRNA gene	predicted gene, 40653
Tssr118193	13	3298864 to 3298875	11	+	TSS region	transcription start site region 118193
Gm9616	13	3298887 to 3299667	780	+	pseudogene	predicted gene 9616
Gm48530	13	3325296 to 3358455	33159	-	lincRNA gene	predicted gene, 48530