Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:27925761-28667983

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm8045 13 27928608 to 27929601 993 + pseudogene predicted gene 8045
Gm34165 13 27929606 to 27930779 1173 + pseudogene predicted gene, 34165
Gm11360 13 27956153 to 27956414 261 + pseudogene predicted gene 11360
Gm18881 13 28006512 to 28008056 1544 + pseudogene predicted gene, 18881
Tssr119048 13 28016210 to 28016215 5 + TSS region transcription start site region 119048
Prl4a1 13 28016223 to 28023546 7323 + protein coding gene prolactin family 4, subfamily a, member 1
Tssr119049 13 28020243 to 28020252 9 + TSS region transcription start site region 119049
Tssr119050 13 28021414 to 28021420 6 + TSS region transcription start site region 119050
Gm47019 13 28072061 to 28090874 18813 + pseudogene predicted gene, 47019
Tssr119051 13 28142481 to 28142485 4 + TSS region transcription start site region 119051
Prl5a1 13 28142484 to 28151595 9111 + protein coding gene prolactin family 5, subfamily a, member 1
Tssr119052 13 28257590 to 28257600 10 + TSS region transcription start site region 119052
Gm11361 13 28257615 to 28258138 523 + pseudogene predicted pseudogene 11361
Gm47172 13 28285569 to 28309898 24329 + pseudogene predicted gene, 47172
Gm34385 13 28295761 to 28297983 2222 + lncRNA gene predicted gene, 34385
Gm3821 13 28356621 to 28364255 7634 - pseudogene predicted gene 3821
Tssr121871 13 28364315 to 28364321 6 - TSS region transcription start site region 121871
Gm40841 13 28396122 to 28420558 24436 - lincRNA gene predicted gene, 40841
A130022D17Rik 13 28398201 to 28401624 3423 unclassified gene RIKEN cDNA A130022D17 gene
A930025H08Rik 13 28409867 to 28411310 1443 unclassified gene RIKEN cDNA A930025H08 gene
Tssr121872 13 28413096 to 28413100 4 - TSS region transcription start site region 121872
Tssr119053 13 28417534 to 28417549 15 + TSS region transcription start site region 119053
Cpgi5394 13 28419889 to 28420048 159 CpG island CpG island 5394
Tssr121873 13 28419979 to 28419992 13 - TSS region transcription start site region 121873
Tssr121874 13 28419994 to 28420008 14 - TSS region transcription start site region 121874
Tssr121875 13 28450505 to 28450510 5 - TSS region transcription start site region 121875
2610307P16Rik 13 28460034 to 28885422 425388 - lncRNA gene RIKEN cDNA 2610307P16 gene
Gm6081 13 28510744 to 28511232 488 - pseudogene predicted gene 6081
Tssr121876 13 28519680 to 28519684 4 - TSS region transcription start site region 121876
Tssr121877 13 28523166 to 28523169 3 - TSS region transcription start site region 121877
E130104P22Rik 13 28529801 to 28533402 3601 unclassified gene RIKEN cDNA E130104P22 gene
Tssr4024 13 28532499 to 28532502 3 + TSS region transcription start site region 4024
Tssr121878 13 28537693 to 28537697 4 - TSS region transcription start site region 121878
Tssr121879 13 28538412 to 28538414 2 - TSS region transcription start site region 121879
Tssr121880 13 28554868 to 28554914 46 - TSS region transcription start site region 121880
Tssr119054 13 28575744 to 28575748 4 + TSS region transcription start site region 119054
Tssr121881 13 28650140 to 28650146 6 - TSS region transcription start site region 121881
Tssr121882 13 28652702 to 28652706 4 - TSS region transcription start site region 121882
Tssr121883 13 28663379 to 28663383 4 - TSS region transcription start site region 121883