Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:27512061-28650874

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prl8a8 13 27506968 to 27513217 6249 - protein coding gene prolactin family 8, subfamily a, member 81
Tssr121854 13 27513181 to 27513196 15 - TSS region transcription start site region 121854
Tssr121855 13 27513206 to 27513225 19 - TSS region transcription start site region 121855
Prl8a9 13 27557995 to 27564606 6611 - protein coding gene prolactin family8, subfamily a, member 9
Tssr119042 13 27559289 to 27559292 3 + TSS region transcription start site region 119042
Tssr119043 13 27559295 to 27559303 8 + TSS region transcription start site region 119043
Tssr119044 13 27559309 to 27559328 19 + TSS region transcription start site region 119044
Tssr121856 13 27562453 to 27562454 1 - TSS region transcription start site region 121856
Tssr121857 13 27562541 to 27562552 11 - TSS region transcription start site region 121857
Tssr121858 13 27564598 to 27564609 11 - TSS region transcription start site region 121858
Prl8a1 13 27573922 to 27582171 8249 - protein coding gene prolactin family 8, subfamily a, member 1
Tssr121859 13 27582168 to 27582172 4 - TSS region transcription start site region 121859
Prl7b1 13 27601819 to 27610582 8763 - protein coding gene prolactin family 7, subfamily b, member 1
Tssr121860 13 27610580 to 27610583 3 - TSS region transcription start site region 121860
Prl7a1 13 27633366 to 27642493 9127 - protein coding gene prolactin family 7, subfamily a, member 1
Tssr119045 13 27637565 to 27637591 26 + TSS region transcription start site region 119045
Tssr121861 13 27637623 to 27637645 22 - TSS region transcription start site region 121861
Tssr121862 13 27640747 to 27640754 7 - TSS region transcription start site region 121862
Tssr121863 13 27640761 to 27640779 18 - TSS region transcription start site region 121863
Tssr121864 13 27640809 to 27640816 7 - TSS region transcription start site region 121864
Tssr121865 13 27642477 to 27642482 5 - TSS region transcription start site region 121865
Tssr121866 13 27642484 to 27642499 15 - TSS region transcription start site region 121866
Tssr121867 13 27642571 to 27642576 5 - TSS region transcription start site region 121867
Prl7a2 13 27658584 to 27668036 9452 - protein coding gene prolactin family 7, subfamily a, member 2
Tssr121868 13 27668034 to 27668039 5 - TSS region transcription start site region 121868
Gm11359 13 27683200 to 27690869 7669 - pseudogene predicted gene 11359
Tssr121869 13 27693323 to 27693332 9 - TSS region transcription start site region 121869
Prl7d1 13 27708998 to 27716748 7750 - protein coding gene prolactin family 7, subfamily d, member 1
Tssr121870 13 27716729 to 27716741 12 - TSS region transcription start site region 121870
Prl7c1 13 27773495 to 27780804 7309 - protein coding gene prolactin family 7, subfamily c, member 1
Tssr119046 13 27801638 to 27801654 16 + TSS region transcription start site region 119046
Prl2a1 13 27801655 to 27808716 7061 + protein coding gene prolactin family 2, subfamily a, member 1
Tssr119047 13 27849339 to 27849342 3 + TSS region transcription start site region 119047
Prl2c1 13 27849342 to 27857788 8446 + protein coding gene Prolactin family 2, subfamily c, member 1
Gm22476 13 27874089 to 27874188 99 + snRNA gene predicted gene, 22476
Gm8045 13 27928608 to 27929601 993 + pseudogene predicted gene 8045
Gm34165 13 27929606 to 27930779 1173 + pseudogene predicted gene, 34165
Gm11360 13 27956153 to 27956414 261 + pseudogene predicted gene 11360
Gm18881 13 28006512 to 28008056 1544 + pseudogene predicted gene, 18881
Tssr119048 13 28016210 to 28016215 5 + TSS region transcription start site region 119048
Prl4a1 13 28016223 to 28023546 7323 + protein coding gene prolactin family 4, subfamily a, member 1
Tssr119049 13 28020243 to 28020252 9 + TSS region transcription start site region 119049
Tssr119050 13 28021414 to 28021420 6 + TSS region transcription start site region 119050
Gm47019 13 28072061 to 28090874 18813 + pseudogene predicted gene, 47019
Tssr119051 13 28142481 to 28142485 4 + TSS region transcription start site region 119051
Prl5a1 13 28142484 to 28151595 9111 + protein coding gene prolactin family 5, subfamily a, member 1
Tssr119052 13 28257590 to 28257600 10 + TSS region transcription start site region 119052
Gm11361 13 28257615 to 28258138 523 + pseudogene predicted pseudogene 11361
Gm47172 13 28285569 to 28309898 24329 + pseudogene predicted gene, 47172
Gm34385 13 28295761 to 28297983 2222 + lncRNA gene predicted gene, 34385
Gm3821 13 28356621 to 28364255 7634 - pseudogene predicted gene 3821
Tssr121871 13 28364315 to 28364321 6 - TSS region transcription start site region 121871
Gm40841 13 28396122 to 28420558 24436 - lincRNA gene predicted gene, 40841
A130022D17Rik 13 28398201 to 28401624 3423 unclassified gene RIKEN cDNA A130022D17 gene
A930025H08Rik 13 28409867 to 28411310 1443 unclassified gene RIKEN cDNA A930025H08 gene
Tssr121872 13 28413096 to 28413100 4 - TSS region transcription start site region 121872
Tssr119053 13 28417534 to 28417549 15 + TSS region transcription start site region 119053
Cpgi5394 13 28419889 to 28420048 159 CpG island CpG island 5394
Tssr121873 13 28419979 to 28419992 13 - TSS region transcription start site region 121873
Tssr121874 13 28419994 to 28420008 14 - TSS region transcription start site region 121874
Tssr121875 13 28450505 to 28450510 5 - TSS region transcription start site region 121875
2610307P16Rik 13 28460034 to 28885422 425388 - lncRNA gene RIKEN cDNA 2610307P16 gene
Gm6081 13 28510744 to 28511232 488 - pseudogene predicted gene 6081
Tssr121876 13 28519680 to 28519684 4 - TSS region transcription start site region 121876
Tssr121877 13 28523166 to 28523169 3 - TSS region transcription start site region 121877
E130104P22Rik 13 28529801 to 28533402 3601 unclassified gene RIKEN cDNA E130104P22 gene
Tssr4024 13 28532499 to 28532502 3 + TSS region transcription start site region 4024
Tssr121878 13 28537693 to 28537697 4 - TSS region transcription start site region 121878
Tssr121879 13 28538412 to 28538414 2 - TSS region transcription start site region 121879
Tssr121880 13 28554868 to 28554914 46 - TSS region transcription start site region 121880
Tssr119054 13 28575744 to 28575748 4 + TSS region transcription start site region 119054
Tssr121881 13 28650140 to 28650146 6 - TSS region transcription start site region 121881