Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:26677601-27437611

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47883 13 26680568 to 26680693 125 - pseudogene predicted gene, 47883
Hdgfl1 13 26768173 to 26770165 1992 - protein coding gene HDGF like 1
Tssr119011 13 26769366 to 26769377 11 + TSS region transcription start site region 119011
4921520N01Rik 13 26769393 to 26772727 3334 + antisense lncRNA gene RIKEN cDNA 4921520N01 gene
Cpgi5393 13 26769723 to 26770211 488 CpG island CpG island 5393
Tssr121829 13 26770095 to 26770104 9 - TSS region transcription start site region 121829
Tssr121830 13 26770110 to 26770119 9 - TSS region transcription start site region 121830
Tssr121831 13 26770127 to 26770150 23 - TSS region transcription start site region 121831
Tssr121832 13 26770157 to 26770174 17 - TSS region transcription start site region 121832
Gm11354 13 26787365 to 26787786 421 - pseudogene predicted gene 11354
Tssr121833 13 26787796 to 26787810 14 - TSS region transcription start site region 121833
Tssr119012 13 26855204 to 26855208 4 + TSS region transcription start site region 119012
Gm11355 13 26899691 to 26899996 305 - pseudogene predicted gene 11355
Gm47888 13 26968491 to 27058022 89531 - antisense lncRNA gene predicted gene, 47888
Prl 13 27057570 to 27065204 7634 + protein coding gene prolactin
Tssr119013 13 27057571 to 27057584 13 + TSS region transcription start site region 119013
Tssr119014 13 27057601 to 27057611 10 + TSS region transcription start site region 119014
Tssr119015 13 27059382 to 27059391 9 + TSS region transcription start site region 119015
Tssr119016 13 27059432 to 27059439 7 + TSS region transcription start site region 119016
Tssr119017 13 27059498 to 27059507 9 + TSS region transcription start site region 119017
Tssr119018 13 27061527 to 27061538 11 + TSS region transcription start site region 119018
Tssr119019 13 27064344 to 27064356 12 + TSS region transcription start site region 119019
Tssr119020 13 27065142 to 27065148 6 + TSS region transcription start site region 119020
Tssr119021 13 27094188 to 27094191 3 + TSS region transcription start site region 119021
Prl3d1 13 27094190 to 27100258 6068 + protein coding gene prolactin family 3, subfamily d, member 1
Prl3d2 13 27121698 to 27127555 5857 + protein coding gene prolactin family 3, subfamily d, member 1
Prl3d3 13 27156790 to 27162593 5803 + protein coding gene prolactin family 3, subfamily d, member 3
Tssr119022 13 27196640 to 27196646 6 + TSS region transcription start site region 119022
Prl3c1 13 27196660 to 27203749 7089 + protein coding gene prolactin family 3, subfamily c, member 1
Tssr121834 13 27198796 to 27198801 5 - TSS region transcription start site region 121834
Tssr119023 13 27241021 to 27241038 17 + TSS region transcription start site region 119023
Tssr4023 13 27241811 to 27241837 26 + TSS region transcription start site region 4023
Tssr119024 13 27242422 to 27242437 15 + TSS region transcription start site region 119024
Prl3b1 13 27242430 to 27249740 7310 + protein coding gene prolactin family 3, subfamily b, member 1
Tssr119025 13 27243740 to 27243753 13 + TSS region transcription start site region 119025
Tssr119026 13 27243786 to 27243789 3 + TSS region transcription start site region 119026
Tssr121835 13 27243823 to 27243843 20 - TSS region transcription start site region 121835
Tssr119027 13 27245805 to 27245821 16 + TSS region transcription start site region 119027
Tssr121836 13 27245848 to 27245885 37 - TSS region transcription start site region 121836
Tssr121837 13 27247828 to 27247870 42 - TSS region transcription start site region 121837
Tssr119028 13 27247832 to 27247891 59 + TSS region transcription start site region 119028
Tssr121838 13 27247911 to 27247955 44 - TSS region transcription start site region 121838
Tssr121839 13 27249465 to 27249487 22 - TSS region transcription start site region 121839
Tssr121840 13 27249490 to 27249497 7 - TSS region transcription start site region 121840
Tssr121841 13 27249499 to 27249504 5 - TSS region transcription start site region 121841
Tssr119029 13 27249545 to 27249550 5 + TSS region transcription start site region 119029
Tssr119030 13 27259482 to 27259494 12 + TSS region transcription start site region 119030
Prl3a1 13 27259489 to 27276660 17171 + protein coding gene prolactin family 3, subfamily a, member 1
Tssr119031 13 27259590 to 27259600 10 + TSS region transcription start site region 119031
Tssr119032 13 27280329 to 27280333 4 + TSS region transcription start site region 119032
4930511O05Rik 13 27292616 to 27306032 13416 + lincRNA gene RIKEN cDNA 4930511O05 gene
Gm11356 13 27306712 to 27306903 191 + pseudogene predicted gene 11356
Tssr119033 13 27312610 to 27312627 17 + TSS region transcription start site region 119033
Prl6a1 13 27312627 to 27319252 6625 + protein coding gene prolactin family 6, subfamily a, member 1
Tssr119034 13 27312652 to 27312656 4 + TSS region transcription start site region 119034
Gm11357 13 27314084 to 27314840 756 + pseudogene predicted gene 11357
Gm11358 13 27331428 to 27334404 2976 + pseudogene predicted gene 11358
Tssr121842 13 27342918 to 27342930 12 - TSS region transcription start site region 121842
Tssr119035 13 27345661 to 27345679 18 + TSS region transcription start site region 119035
Prl8a2 13 27345673 to 27354216 8543 + protein coding gene prolactin family 8, subfamily a, member 2
Tssr119036 13 27345684 to 27345685 1 + TSS region transcription start site region 119036
Tssr119037 13 27345694 to 27345701 7 + TSS region transcription start site region 119037
Tssr119038 13 27348872 to 27348881 9 + TSS region transcription start site region 119038
Tssr119039 13 27349007 to 27349013 6 + TSS region transcription start site region 119039
Tssr119040 13 27354114 to 27354120 6 + TSS region transcription start site region 119040
Tssr119041 13 27354126 to 27354131 5 + TSS region transcription start site region 119041
Prl2b1 13 27383345 to 27390846 7501 - protein coding gene prolactin family 2, subfamily b, member 1
Tssr121843 13 27390839 to 27390848 9 - TSS region transcription start site region 121843
Gm40836 13 27395407 to 27432740 37333 + lncRNA gene predicted gene, 40836
Prl8a6 13 27432681 to 27438688 6007 - protein coding gene prolactin family 8, subfamily a, member 6
Tssr121844 13 27435096 to 27435100 4 - TSS region transcription start site region 121844
Tssr121845 13 27435417 to 27435423 6 - TSS region transcription start site region 121845
Tssr121846 13 27437072 to 27437080 8 - TSS region transcription start site region 121846
Tssr121847 13 27437122 to 27437133 11 - TSS region transcription start site region 121847
Tssr121848 13 27437162 to 27437170 8 - TSS region transcription start site region 121848