Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:26197359-26917505

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D13Mit133 13 26226802 to 26226951 149 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 133
D13Mit220 13 26247014 to 26247125 111 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 220
1700092E19Rik 13 26283159 to 26312406 29247 - lincRNA gene RIKEN cDNA 1700092E19 gene
Tssr121828 13 26312385 to 26312403 18 - TSS region transcription start site region 121828
Gm47881 13 26358954 to 26360026 1072 - unclassified gene predicted gene, 47881
Gm11353 13 26492554 to 26493180 626 + pseudogene predicted gene 11353
D13Mit273 13 26548835 to 26548921 86 DNA segment DNA Segment, Chr 13, Massachusetts Institute of Technology 273
D13Mit197 13 26557359 to 26557505 146 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 197
Gm47883 13 26680568 to 26680693 125 - pseudogene predicted gene, 47883
Hdgfl1 13 26768173 to 26770165 1992 - protein coding gene HDGF like 1
Tssr119011 13 26769366 to 26769377 11 + TSS region transcription start site region 119011
4921520N01Rik 13 26769393 to 26772727 3334 + antisense lncRNA gene RIKEN cDNA 4921520N01 gene
Cpgi5393 13 26769723 to 26770211 488 CpG island CpG island 5393
Tssr121829 13 26770095 to 26770104 9 - TSS region transcription start site region 121829
Tssr121830 13 26770110 to 26770119 9 - TSS region transcription start site region 121830
Tssr121831 13 26770127 to 26770150 23 - TSS region transcription start site region 121831
Tssr121832 13 26770157 to 26770174 17 - TSS region transcription start site region 121832
Gm11354 13 26787365 to 26787786 421 - pseudogene predicted gene 11354
Tssr121833 13 26787796 to 26787810 14 - TSS region transcription start site region 121833
Tssr119012 13 26855204 to 26855208 4 + TSS region transcription start site region 119012
Gm11355 13 26899691 to 26899996 305 - pseudogene predicted gene 11355