Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:25038169-25820127

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5391 13 25054967 to 25056545 1578 CpG island CpG island 5391
Tssr118997 13 25055278 to 25055297 19 + TSS region transcription start site region 118997
Tssr118998 13 25055464 to 25055497 33 + TSS region transcription start site region 118998
Tssr118999 13 25055964 to 25055975 11 + TSS region transcription start site region 118999
Dcdc2a 13 25056004 to 25210706 154702 + protein coding gene doublecortin domain containing 2a
Tssr119000 13 25056044 to 25056054 10 + TSS region transcription start site region 119000
Tssr119001 13 25056155 to 25056205 50 + TSS region transcription start site region 119001
Tssr119002 13 25056206 to 25056219 13 + TSS region transcription start site region 119002
D13Mit58 13 25073027 to 25073158 131 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 58
Tssr119003 13 25074691 to 25074721 30 + TSS region transcription start site region 119003
Tssr119004 13 25074748 to 25074756 8 + TSS region transcription start site region 119004
Tssr119005 13 25097575 to 25097579 4 + TSS region transcription start site region 119005
Tssr119006 13 25127251 to 25127257 6 + TSS region transcription start site region 119006
Gm11348 13 25130747 to 25131064 317 - pseudogene predicted gene 11348
Tssr119007 13 25151722 to 25151745 23 + TSS region transcription start site region 119007
4930483C01Rik 13 25170721 to 25171830 1109 unclassified gene RIKEN cDNA 4930483C01 gene
Tssr119008 13 25187438 to 25187456 18 + TSS region transcription start site region 119008
Tssr119009 13 25191881 to 25191886 5 + TSS region transcription start site region 119009
Tssr119010 13 25208386 to 25208391 5 + TSS region transcription start site region 119010
D13Mit176 13 25225237 to 25225371 134 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 176
Nrsn1 13 25252039 to 25269996 17957 - protein coding gene neurensin 1
Tssr121821 13 25269166 to 25269213 47 - TSS region transcription start site region 121821
Cpgi5392 13 25269721 to 25270224 503 CpG island CpG island 5392
Tssr121822 13 25269898 to 25269907 9 - TSS region transcription start site region 121822
Tssr121823 13 25269913 to 25269914 1 - TSS region transcription start site region 121823
Tssr121824 13 25269920 to 25270025 105 - TSS region transcription start site region 121824
Tssr121825 13 25270036 to 25270050 14 - TSS region transcription start site region 121825
Tssr121826 13 25270076 to 25270094 18 - TSS region transcription start site region 121826
D13Mit163 13 25332198 to 25332338 140 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 163
Gm34122 13 25360511 to 25371720 11209 + lncRNA gene predicted gene, 34122
F830002E08Rik 13 25428169 to 25430127 1958 - unclassified gene RIKEN cDNA F830002E08 gene
Tpi-rs8 13 25455722 to 25456429 707 + pseudogene triosephosphate isomerase related sequence 8
Gm11349 13 25582271 to 25583386 1115 - pseudogene predicted gene 11349
D13Mit84 13 25629247 to 25629465 218 DNA segment DNA segment, Chr 13, Massachusetts Institute of Technology 84
Gm11350 13 25680542 to 25681146 604 - pseudogene predicted gene 11350
Tssr4021 13 25688404 to 25688407 3 + TSS region transcription start site region 4021