Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:24870616-24940633

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D130043K22Rik 13 24845135 to 24901270 56135 + protein coding gene RIKEN cDNA D130043K22 gene
Tssr118974 13 24879865 to 24879870 5 + TSS region transcription start site region 118974
Tssr118975 13 24905592 to 24905609 17 + TSS region transcription start site region 118975
4932702P03Rik 13 24905600 to 24911780 6180 + antisense lncRNA gene RIKEN cDNA 4932702P03 gene
Tssr118976 13 24905616 to 24905633 17 + TSS region transcription start site region 118976
Tssr118977 13 24905635 to 24905647 12 + TSS region transcription start site region 118977
Tssr118978 13 24905656 to 24905661 5 + TSS region transcription start site region 118978
Aldh5a1 13 24907579 to 24937661 30082 - protein coding gene aldhehyde dehydrogenase family 5, subfamily A1
Cpgi5389 13 24937084 to 24938170 1086 CpG island CpG island 5389
Tssr118979 13 24937144 to 24937166 22 + TSS region transcription start site region 118979
Tssr118980 13 24937178 to 24937204 26 + TSS region transcription start site region 118980
Tssr118981 13 24937208 to 24937219 11 + TSS region transcription start site region 118981
9330162012Rik 13 24937401 to 24939049 1648 + bidirectional promoter lncRNA gene cDNA RIKEN 9330162012 gene
Tssr121817 13 24937585 to 24937691 106 - TSS region transcription start site region 121817