Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 13:24800592-25010609

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi5386 13 24800648 to 24802431 1783 CpG island CpG island 5386
Tssr121810 13 24800752 to 24800772 20 - TSS region transcription start site region 121810
Tssr121811 13 24800778 to 24800789 11 - TSS region transcription start site region 121811
Tssr118946 13 24801137 to 24801158 21 + TSS region transcription start site region 118946
Tssr118947 13 24801171 to 24801184 13 + TSS region transcription start site region 118947
Tssr118948 13 24801194 to 24801213 19 + TSS region transcription start site region 118948
Tssr118949 13 24801332 to 24801339 7 + TSS region transcription start site region 118949
BC005537 13 24801657 to 24812899 11242 + protein coding gene cDNA sequence BC005537
Tssr118950 13 24802857 to 24802867 10 + TSS region transcription start site region 118950
Tssr118951 13 24802869 to 24802893 24 + TSS region transcription start site region 118951
Tssr118952 13 24802957 to 24802972 15 + TSS region transcription start site region 118952
Tssr118953 13 24802991 to 24803008 17 + TSS region transcription start site region 118953
Tssr118954 13 24803018 to 24803035 17 + TSS region transcription start site region 118954
Tssr118955 13 24803351 to 24803367 16 + TSS region transcription start site region 118955
Tssr118956 13 24803701 to 24803713 12 + TSS region transcription start site region 118956
Tssr118957 13 24804909 to 24804929 20 + TSS region transcription start site region 118957
Tssr118958 13 24806927 to 24806932 5 + TSS region transcription start site region 118958
Gm22358 13 24811447 to 24811568 121 - snoRNA gene predicted gene, 22358
Tssr118959 13 24812711 to 24812722 11 + TSS region transcription start site region 118959
Tssr118960 13 24813336 to 24813352 16 + TSS region transcription start site region 118960
Tssr118961 13 24813398 to 24813451 53 + TSS region transcription start site region 118961
Tssr118962 13 24813454 to 24813487 33 + TSS region transcription start site region 118962
Tssr118963 13 24813492 to 24813505 13 + TSS region transcription start site region 118963
Tssr118964 13 24813506 to 24813522 16 + TSS region transcription start site region 118964
Tssr118965 13 24813533 to 24813544 11 + TSS region transcription start site region 118965
Tssr118966 13 24813554 to 24813570 16 + TSS region transcription start site region 118966
Tssr118967 13 24813667 to 24813713 46 + TSS region transcription start site region 118967
Tssr118968 13 24813729 to 24813762 33 + TSS region transcription start site region 118968
Tssr118969 13 24814047 to 24814052 5 + TSS region transcription start site region 118969
Acot13 13 24817955 to 24831489 13534 - protein coding gene acyl-CoA thioesterase 13
Cpgi5387 13 24831111 to 24832380 1269 CpG island CpG island 5387
Tssr121812 13 24831322 to 24831333 11 - TSS region transcription start site region 121812
Tssr121813 13 24831337 to 24831348 11 - TSS region transcription start site region 121813
Tssr121814 13 24831353 to 24831408 55 - TSS region transcription start site region 121814
Tssr121815 13 24831409 to 24831518 109 - TSS region transcription start site region 121815
Tssr121816 13 24831588 to 24831639 51 - TSS region transcription start site region 121816
Tssr118970 13 24831661 to 24831687 26 + TSS region transcription start site region 118970
Tdp2 13 24831679 to 24842153 10474 + protein coding gene tyrosyl-DNA phosphodiesterase 2
Tssr118971 13 24831700 to 24831721 21 + TSS region transcription start site region 118971
Cpgi5388 13 24844898 to 24845381 483 CpG island CpG island 5388
Tssr118972 13 24845106 to 24845120 14 + TSS region transcription start site region 118972
Tssr118973 13 24845122 to 24845186 64 + TSS region transcription start site region 118973
D130043K22Rik 13 24845135 to 24901270 56135 + protein coding gene RIKEN cDNA D130043K22 gene
Tssr118974 13 24879865 to 24879870 5 + TSS region transcription start site region 118974
Tssr118975 13 24905592 to 24905609 17 + TSS region transcription start site region 118975
4932702P03Rik 13 24905600 to 24911780 6180 + antisense lncRNA gene RIKEN cDNA 4932702P03 gene
Tssr118976 13 24905616 to 24905633 17 + TSS region transcription start site region 118976
Tssr118977 13 24905635 to 24905647 12 + TSS region transcription start site region 118977
Tssr118978 13 24905656 to 24905661 5 + TSS region transcription start site region 118978
Aldh5a1 13 24907579 to 24937661 30082 - protein coding gene aldhehyde dehydrogenase family 5, subfamily A1
Cpgi5389 13 24937084 to 24938170 1086 CpG island CpG island 5389
Tssr118979 13 24937144 to 24937166 22 + TSS region transcription start site region 118979
Tssr118980 13 24937178 to 24937204 26 + TSS region transcription start site region 118980
Tssr118981 13 24937208 to 24937219 11 + TSS region transcription start site region 118981
9330162012Rik 13 24937401 to 24939049 1648 + bidirectional promoter lncRNA gene cDNA RIKEN 9330162012 gene
Tssr121817 13 24937585 to 24937691 106 - TSS region transcription start site region 121817
Tssr118982 13 24942690 to 24942711 21 + TSS region transcription start site region 118982
Tssr118983 13 24942714 to 24942764 50 + TSS region transcription start site region 118983
Tssr118984 13 24942895 to 24942930 35 + TSS region transcription start site region 118984
Tssr118985 13 24943144 to 24943164 20 + TSS region transcription start site region 118985
Gpld1 13 24943152 to 24992501 49349 + protein coding gene glycosylphosphatidylinositol specific phospholipase D1
Tssr118986 13 24943165 to 24943176 11 + TSS region transcription start site region 118986
Tssr118987 13 24943180 to 24943207 27 + TSS region transcription start site region 118987
Tssr118988 13 24943212 to 24943222 10 + TSS region transcription start site region 118988
Tssr118989 13 24943485 to 24943509 24 + TSS region transcription start site region 118989
Tssr118990 13 24943518 to 24943531 13 + TSS region transcription start site region 118990
Tssr118991 13 24943542 to 24943562 20 + TSS region transcription start site region 118991
Tssr118992 13 24943567 to 24943576 9 + TSS region transcription start site region 118992
Tssr118993 13 24943578 to 24943593 15 + TSS region transcription start site region 118993
Tssr118994 13 24943595 to 24943606 11 + TSS region transcription start site region 118994
Tssr118995 13 24964279 to 24964285 6 + TSS region transcription start site region 118995
Gm34019 13 24965108 to 24968304 3196 - lncRNA gene predicted gene, 34019
Tssr4020 13 24966952 to 24966954 2 - TSS region transcription start site region 4020
Mrs2 13 24987483 to 25020365 32882 - protein coding gene MRS2 magnesium transporter
Gm9983 13 24989318 to 24989644 326 protein coding gene predicted gene 9983
Tssr118996 13 24990366 to 24990409 43 + TSS region transcription start site region 118996